Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein S10, conserved site

Term: IPR018268  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2493 SustainPine v2.0 1966
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Sorghum bicolor RepID=C5YW23_SORBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Complete
sp_v2.0_unigene4181 SustainPine v2.0 2485
AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Selaginella moellendorffii RepID=D8REC4_SELML 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 11-like 0.0
Complete
sp_v2.0_unigene4960 SustainPine v2.0 2037
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5A9Z6_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Complete
sp_v2.0_unigene5672 SustainPine v2.0 1539
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Medicago truncatula RepID=Q2HTC9_MEDTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fatty acid elongase 3-ketoacyl- synthase 1 0.0
C-terminus
sp_v2.0_unigene6307 SustainPine v2.0 1889
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Marchantia polymorpha RepID=Q84VI8_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl- -synthase 0.0
Complete
sp_v2.0_unigene8718 SustainPine v2.0 3042
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Complete
sp_v2.0_unigene9015 SustainPine v2.0 818
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 10-like 0.0
Putative N-terminus
sp_v2.0_unigene9460 SustainPine v2.0 1190
AutoFact: 30S ribosomal protein S10, putative n=1 Tax=Ricinus communis RepID=B9S9Q5_RICCO 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s10 0.0
Complete
sp_v2.0_unigene11329 SustainPine v2.0 815
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Medicago truncatula RepID=Q2HTC9_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fatty acid elongase 0.0
C-terminus
sp_v2.0_unigene11921 SustainPine v2.0 706
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJJ8_PHYPA 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl-coa synthase family protein 0.0
N-terminus
sp_v2.0_unigene13404 SustainPine v2.0 1747
AutoFact: 3-ketoacyl-CoA synthase n=7 Tax=Poaceae RepID=C5YVX8_SORBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 9 0.0
Complete
sp_v2.0_unigene15427 SustainPine v2.0 992
AutoFact: 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s20 0.0
Complete
sp_v2.0_unigene16321 SustainPine v2.0 1882
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 10-like 0.0
C-terminus
sp_v2.0_unigene16632 SustainPine v2.0 767
AutoFact: PREDICTED: similar to LTA2 (PLASTID E2 SUBUNIT OF PYRUVATE DECARBOXYLASE); dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Vitis vinifera RepID=UPI00019828C8 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.6588e-28
Putative N-terminus
sp_v2.0_unigene16948 SustainPine v2.0 1787
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 3-ketoacyl- synthase 6-like 0.0
Complete
sp_v2.0_unigene19118 SustainPine v2.0 610
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g68530 t26j14_10 0.0
C-terminus
sp_v2.0_unigene19361 SustainPine v2.0 797
AutoFact: 40S ribosomal protein S20-1 n=12 Tax=rosids RepID=RS201_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s20 0.0
Complete
sp_v2.0_unigene21396 SustainPine v2.0 2683
AutoFact: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SLH2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase mitochondrial-like 0.0
Complete
sp_v2.0_unigene27563 SustainPine v2.0 2053
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Complete
sp_v2.0_unigene27696 SustainPine v2.0 1031
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl- synthase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain