Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein S10, conserved site

Term: IPR018268  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene28484 SustainPine v2.0 1461
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene29574 SustainPine v2.0 821
AutoFact: 40S ribosomal protein S20-1 n=12 Tax=rosids RepID=RS201_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s20 0.0
Complete
sp_v2.0_unigene30454 SustainPine v2.0 1689
AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Tropaeolum majus RepID=Q1ZZJ8_TROMA 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene33941 SustainPine v2.0 763
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5A9Z6_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 11-like 0.0
Internal
sp_v2.0_unigene34851 SustainPine v2.0 696
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Ricinus communis RepID=B9T7E3_RICCO 5.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene37057 SustainPine v2.0 491
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fatty acid elongase 0.0
Internal
sp_v2.0_unigene44382 SustainPine v2.0 675
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Medicago truncatula RepID=Q2HTC9_MEDTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fatty acid elongase 0.0
Internal
sp_v2.0_unigene56885 SustainPine v2.0 335
AutoFact: 30S ribosomal protein S10 n=99 Tax=Staphylococcus RepID=RS10_STAA1 8.0e-17
FL-Next: sp=30S ribosomal protein S10, chloroplastic; Guillardia theta (Cryptomonas phi). Plastid; Chloroplast. 0.0
Blast2go: 30s ribosomal protein s10 3.32016e-22
N-terminus
sp_v2.0_unigene59366 SustainPine v2.0 708
AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Vitis vinifera RepID=A5AJT6_VITVI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl- synthase family protein 0.0
Internal
sp_v2.0_unigene60270 SustainPine v2.0 777
AutoFact: 40S ribosomal protein S20-1 n=12 Tax=rosids RepID=RS201_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s20 0.0
Complete
sp_v2.0_unigene60285 SustainPine v2.0 748
AutoFact: 40S ribosomal protein S20-1 n=12 Tax=rosids RepID=RS201_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s20 0.0
Complete
sp_v2.0_unigene61522 SustainPine v2.0 975
AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Oryza sativa RepID=Q6F365_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: senescence-associated protein 15 0.0
N-terminus
sp_v2.0_unigene61791 SustainPine v2.0 944
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl-coa synthase family protein 0.0
C-terminus
sp_v2.0_unigene63937 SustainPine v2.0 833
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Sorghum bicolor RepID=C5YW23_SORBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 9 0.0
Putative N-terminus
sp_v2.0_unigene80192 SustainPine v2.0 502
AutoFact: 3-ketoacyl-CoA synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TBW0_VITVI 3.0e-33
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl-coa synthase family protein 8.39221e-34
C-terminus
sp_v2.0_unigene81153 SustainPine v2.0 812
AutoFact: 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s20 0.0
Complete
sp_v2.0_unigene85656 SustainPine v2.0 898
AutoFact: 3-ketoacyl-CoA synthase n=5 Tax=Poaceae RepID=Q69X62_ORYSJ 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl-coa synthase family protein 0.0
Internal
sp_v2.0_unigene91866 SustainPine v2.0 337
AutoFact: 40S subunit ribosomal protein [Oryza sativa Japonica Group] dbj|BAB61063.1| 40S ribosomal protein S20 [Oryza sativa (japonica cultivar-group)] 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s20 1.38779e-23
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain