Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Nucleic acid-binding, OB-fold

Term: IPR012340  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene26526 SustainPine v2.0 2678
AutoFact: DNA replication licensing factor MCM3 homolog 1 n=9 Tax=Poaceae RepID=MCM31_MAIZE 0.0
FL-Next: sp=DNA replication licensing factor MCM3 homolog 3; Zea mays (Maize). 0.0
Blast2go: dna replication licensing factor mcm3 homolog 1-like 0.0
Complete
sp_v2.0_unigene26711 SustainPine v2.0 1384
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene26729 SustainPine v2.0 901
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
Putative C-terminus
sp_v2.0_unigene27095 SustainPine v2.0 1443
AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase prp16-like 0.0
Complete
sp_v2.0_unigene27318 SustainPine v2.0 1248
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 1.0e-37
FL-Next: sp=DNA replication licensing factor MCM3 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at2g07360-like protein 0.0
N-terminus
sp_v2.0_unigene27348 SustainPine v2.0 871
AutoFact: Translation initiation factor n=4 Tax=Magnoliophyta RepID=B5M1Y2_RHEAU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene27570 SustainPine v2.0 1415
AutoFact: transmembrane protein G1P-related 1 [Arabidopsis thaliana] gb|AAB18126.1| G1p [Arabidopsis thaliana] gb|AAC14406.1| putative transmembrane protein G1p [Arabidopsis thaliana] gb|AAO42853.1| At3g51790 [Arabidopsis thaliana] dbj|BAE99476.1| Cytochrome C Matu 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: cytochrome c-type biogenesis protein 0.0
Complete
sp_v2.0_unigene27766 SustainPine v2.0 1136
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase 53-like 0.0
C-terminus
sp_v2.0_unigene27864 SustainPine v2.0 2475
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor a1 0.0
Complete
sp_v2.0_unigene27923 SustainPine v2.0 1949
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor a1 0.0
Complete
sp_v2.0_unigene27957 SustainPine v2.0 300
AutoFact: putative DNA replication licensing factor [Arabidopsis thaliana] 4.0e-32
FL-Next: tr=Minichromosome maintenance protein MCM, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna replication licensing factor mcm9-like 2.0459e-42
Internal
sp_v2.0_unigene28011 SustainPine v2.0 2251
AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene28121 SustainPine v2.0 1325
AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: eukaryotic translation initiation factor 5a 0.0
Complete
sp_v2.0_unigene28447 SustainPine v2.0 1013
AutoFact: kinesin-like heavy chain [Arabidopsis thaliana] 5.0e-24
FL-Next: sp=Kinesin-4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 3.08727e-34
N-terminus
sp_v2.0_unigene28514 SustainPine v2.0 593
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: recq-mediated genome instability protein 2-like 0.0
Complete
sp_v2.0_unigene28978 SustainPine v2.0 2037
AutoFact: DUF707 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysine ketoglutarate reductase trans-splicing related 1 0.0
Complete
sp_v2.0_unigene29173 SustainPine v2.0 1725
AutoFact: DNA replication licensing factor MCM5 [Aspergillus niger CBS 513.88] emb|CAK44374.1| unnamed protein product [Aspergillus niger] 0.0
FL-Next: sp=DNA replication licensing factor MCM3 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna replication licensing factor mcm5-a-like 0.0
Internal
sp_v2.0_unigene29317 SustainPine v2.0 715
AutoFact: ATP-dependant RNA helicase [Plasmodium vivax SaI-1] gb|EDL44982.1| ATP-dependant RNA helicase, putative [Plasmodium vivax] 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna helicase dhx8 0.0
N-terminus
sp_v2.0_unigene29561 SustainPine v2.0 545
AutoFact: Protection of telomeres 1 protein n=1 Tax=Pinus taeda RepID=B7T1K4_PINTA 0.0
FL-Next: tr=Protection of telomeres 1 protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: protection of telomeres 1 protein 0.0
Putative N-terminus
sp_v2.0_unigene29729 SustainPine v2.0 626
AutoFact: Protection of telomeres 1 protein n=1 Tax=Pinus taeda RepID=B7T1K4_PINTA 0.0
FL-Next: tr=Protection of telomeres 1 protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: protection of telomeres 1 protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain