Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Gonadotropin, beta subunit, conserved site

Term: IPR018245  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene60821 SustainPine v2.0 665
AutoFact: gibberellin-regulated protein 2 [Arabidopsis thaliana] sp|P46688.1|GASA2_ARATH RecName: Full=Gibberellin-regulated protein 2; Flags: Precursor gb|AAB06309.1| GAST1 protein homolog [Arabidopsis thaliana] emb|CAB78084.1| gibberellin-regulated protein GASA2 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gibberellin-regulated protein 1 0.0
Complete
sp_v2.0_unigene61121 SustainPine v2.0 1385
AutoFact: Pyruvate decarboxylase 1 n=1 Tax=Lotus corniculatus RepID=Q84V95_LOTCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pyruvate decarboxylase 0.0
C-terminus
sp_v2.0_unigene61522 SustainPine v2.0 975
AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Oryza sativa RepID=Q6F365_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: senescence-associated protein 15 0.0
N-terminus
sp_v2.0_unigene61791 SustainPine v2.0 944
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl-coa synthase family protein 0.0
C-terminus
sp_v2.0_unigene63937 SustainPine v2.0 833
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Sorghum bicolor RepID=C5YW23_SORBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 9 0.0
Putative N-terminus
sp_v2.0_unigene65349 SustainPine v2.0 341
AutoFact: pfam02704, GASA, Gibberellin regulated protein 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gibberellin-regulated protein 0.0
Putative Complete
sp_v2.0_unigene67531 SustainPine v2.0 507
AutoFact: cellulose synthase-like protein CslE [Nicotiana tabacum] 8.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellulose synthase-like protein e6-like 0.0
Internal
sp_v2.0_unigene67888 SustainPine v2.0 642
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase a catalytic subunit 3 0.0
C-terminus
sp_v2.0_unigene68262 SustainPine v2.0 421
AutoFact: cellulose synthase 5 [Physcomitrella patens] 2.0e-40
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene74601 SustainPine v2.0 318
AutoFact: Cellulose synthase catalytic subunit n=2 Tax=Pinus RepID=Q5DI93_PINTA 4.0e-29
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase a 2.03343e-33
Internal
sp_v2.0_unigene76869 SustainPine v2.0 548
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase catalytic subunit 0.0
Internal
sp_v2.0_unigene77024 SustainPine v2.0 460
AutoFact: Cellulose synthase n=2 Tax=rosids RepID=B9HA33_POPTR 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene77050 SustainPine v2.0 438
AutoFact: Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR 3.9937e-43
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: family 2 glycosyltransferase 0.0
N-terminus
sp_v2.0_unigene77685 SustainPine v2.0 466
AutoFact: cellulose synthase BoCesA4 [Bambusa oldhamii] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene78542 SustainPine v2.0 377
AutoFact: Gibberellin-regulated protein 2, putative n=1 Tax=Ricinus communis RepID=B9SLF4_RICCO 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gibberellin-regulated protein 2 precursor 5.00129e-39
Complete
sp_v2.0_unigene79475 SustainPine v2.0 659
AutoFact: Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase catalytic subunit 0.0
Internal
sp_v2.0_unigene80265 SustainPine v2.0 575
AutoFact: Gibberellin-regulated protein 2, putative n=1 Tax=Ricinus communis RepID=B9SLF4_RICCO 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gibberellin-regulated protein 2 precursor 1.42207e-40
Complete
sp_v2.0_unigene81117 SustainPine v2.0 374
AutoFact: gibberellin-regulated protein [Arabidopsis thaliana] gb|AAK49610.1|AF372894_1 AT5g14920/F2G14_40 [Arabidopsis thaliana] emb|CAC01811.1| putative protein [Arabidopsis thaliana] gb|AAK74054.1| AT5g14920/F2G14_40 [Arabidopsis thaliana] gb|AAL06958.1| AT5g149 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gonadotropin beta chain 3.40206e-33
Putative C-terminus
sp_v2.0_unigene81665 SustainPine v2.0 649
AutoFact: pfam02704, GASA, Gibberellin regulated protein 7.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.21754e-32
Complete
sp_v2.0_unigene81815 SustainPine v2.0 409
AutoFact: gibberellin-regulated protein [Arabidopsis thaliana] gb|AAK49610.1|AF372894_1 AT5g14920/F2G14_40 [Arabidopsis thaliana] emb|CAC01811.1| putative protein [Arabidopsis thaliana] gb|AAK74054.1| AT5g14920/F2G14_40 [Arabidopsis thaliana] gb|AAL06958.1| AT5g149 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gonadotropin beta chain 1.78497e-41
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain