Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Gonadotropin, beta subunit, conserved site

Term: IPR018245  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene16878 SustainPine v2.0 856
AutoFact: gibberellin-regulated protein [Arabidopsis thaliana] gb|AAK49610.1|AF372894_1 AT5g14920/F2G14_40 [Arabidopsis thaliana] emb|CAC01811.1| putative protein [Arabidopsis thaliana] gb|AAK74054.1| AT5g14920/F2G14_40 [Arabidopsis thaliana] gb|AAL06958.1| AT5g149 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gonadotropin beta chain 4.75326e-39
Complete
sp_v2.0_unigene16948 SustainPine v2.0 1787
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 3-ketoacyl- synthase 6-like 0.0
Complete
sp_v2.0_unigene17162 SustainPine v2.0 886
AutoFact: Tryp_alpha_amyl multi-domain protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipid binding 1.06045e-19
C-terminus
sp_v2.0_unigene17630 SustainPine v2.0 551
AutoFact: Gibberellin-regulated protein 2, putative n=1 Tax=Ricinus communis RepID=B9SLF4_RICCO 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gibberellin-regulated protein 2 precursor 1.54507e-40
Complete
sp_v2.0_unigene17727 SustainPine v2.0 711
AutoFact: Gibberellin-regulated protein 3, putative n=1 Tax=Ricinus communis RepID=B9S2K0_RICCO 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gonadotropin beta chain 7.59387e-32
Complete
sp_v2.0_unigene19118 SustainPine v2.0 610
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g68530 t26j14_10 0.0
C-terminus
sp_v2.0_unigene19197 SustainPine v2.0 1990
AutoFact: Pyruvate decarboxylase 1 n=1 Tax=Lotus corniculatus RepID=Q84V95_LOTCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pyruvate decarboxylase 0.0
Putative Complete
sp_v2.0_unigene20277 SustainPine v2.0 1782
AutoFact: cellulose synthase-like protein CslE [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellulose synthase-like protein e6-like 0.0
C-terminus
sp_v2.0_unigene21454 SustainPine v2.0 1047
AutoFact: pfam02704, GASA, Gibberellin regulated protein 4.0e-28
FL-Next: sp=Snakin-2; Solanum tuberosum (Potato). 0.0
Blast2go: gonadotropin beta chain 7.16086e-38
Complete
sp_v2.0_unigene21613 SustainPine v2.0 839
AutoFact: Gibberellin-regulated protein 1, putative n=1 Tax=Ricinus communis RepID=B9SLF3_RICCO 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gibberellin-regulated protein 4.2039e-45
Complete
sp_v2.0_unigene23522 SustainPine v2.0 573
AutoFact: cytochrome c oxidase subunit Vb [Pisum sativum] 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome c oxidase subunit vb precursor 1.7941e-17
C-terminus
sp_v2.0_unigene23845 SustainPine v2.0 771
AutoFact: pfam02704, GASA, Gibberellin regulated protein 3.0e-28
FL-Next: sp=Snakin-2; Solanum tuberosum (Potato). 0.0
Blast2go: gonadotropin beta chain 5.94367e-39
Complete
sp_v2.0_unigene23876 SustainPine v2.0 705
AutoFact: gibberellin-regulated protein [Arabidopsis thaliana] gb|AAK49610.1|AF372894_1 AT5g14920/F2G14_40 [Arabidopsis thaliana] emb|CAC01811.1| putative protein [Arabidopsis thaliana] gb|AAK74054.1| AT5g14920/F2G14_40 [Arabidopsis thaliana] gb|AAL06958.1| AT5g149 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gonadotropin beta chain 2.54993e-28
Putative Complete
sp_v2.0_unigene24260 SustainPine v2.0 608
AutoFact: Gibberellin-regulated protein 2, putative n=1 Tax=Ricinus communis RepID=B9SLF4_RICCO 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gibberellin-regulated protein 2 1.8116e-41
Putative Complete
sp_v2.0_unigene25122 SustainPine v2.0 1546
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
C-terminus
sp_v2.0_unigene27028 SustainPine v2.0 1215
AutoFact: Cytochrome c oxidase subunit Vb n=1 Tax=Oryza sativa Japonica Group RepID=P92683_ORYSJ 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome c oxidase polypeptide vb 0.0
Complete
sp_v2.0_unigene27259 SustainPine v2.0 771
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene27323 SustainPine v2.0 951
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase-like protein 0.0
Internal
sp_v2.0_unigene27563 SustainPine v2.0 2053
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Complete
sp_v2.0_unigene27696 SustainPine v2.0 1031
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl- synthase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain