Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene11965 SustainPine v2.0 951
AutoFact: syntaxin binding protein 5 (tomosyn) [Arabidopsis thaliana] dbj|BAB11546.1| unnamed protein product [Arabidopsis thaliana] gb|AED90890.1| syntaxin binding protein 5 (tomosyn) [Arabidopsis thaliana] 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleotide binding 0.0
Internal
sp_v2.0_unigene12070 SustainPine v2.0 1471
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein spa1-related 3-like 0.0
Complete
sp_v2.0_unigene12081 SustainPine v2.0 557
AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 0.0
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Ostreococcus lucimarinus (strain CCE9901). 0.0
Blast2go: preprotein translocase seca-like protein 0.0
Putative N-terminus
sp_v2.0_unigene12091 SustainPine v2.0 534
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene12112 SustainPine v2.0 640
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9RE28_RICCO 0.0
FL-Next: tr=F-box and wd40 domain protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: stomatal cytokinesis defective scd1 protein 0.0
Internal
sp_v2.0_unigene12138 SustainPine v2.0 404
AutoFact: glycine-rich protein [Arabidopsis thaliana] ref|NP_001190893.1| glycine-rich protein [Arabidopsis thaliana] ref|NP_001190894.1| glycine-rich protein [Arabidopsis thaliana] gb|AEE86144.1| glycine-rich protein [Arabidopsis thaliana] gb|AEE86145.1| glycine-r 5.0e-35
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: uncharacterized protein 2.52234e-44
Internal
sp_v2.0_unigene12253 SustainPine v2.0 456
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAB51411.1| putative protein [Arabidopsis thaliana] emb|CAB81228.1| putative protein [Arabidopsis thaliana] gb|AEE82991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: wd40 repeat-containing protein 0.0
Internal
sp_v2.0_unigene12280 SustainPine v2.0 447
AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 0.0
FL-Next: sp=Protein translocase subunit SecA; Phaeodactylum tricornutum (strain CCAP 1055/1). Plastid; Chloroplast. 0.0
Blast2go: preprotein translocase seca-like protein 0.0
Putative C-terminus
sp_v2.0_unigene12559 SustainPine v2.0 1553
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene12597 SustainPine v2.0 475
AutoFact: putative cleavage stimulation factor subunit 1 [Sorghum bicolor] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene12599 SustainPine v2.0 429
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 4.00001e-41
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
Internal
sp_v2.0_unigene12834 SustainPine v2.0 663
AutoFact: contains region of similarity to beta transducin family [Arabidopsis thaliana] emb|CAB80889.1| AT4g00800 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vacuolar protein sorting-associated protein 8 homolog 0.0
Internal
sp_v2.0_unigene12955 SustainPine v2.0 1958
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T7M5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 44-like 0.0
Complete
sp_v2.0_unigene12995 SustainPine v2.0 1965
AutoFact: embryo sac development arrest 7 protein [Arabidopsis thaliana] emb|CAB72169.1| putative protein [Arabidopsis thaliana] gb|AAL47467.1| AT3g56990/F24I3_70 [Arabidopsis thaliana] gb|AEE79596.1| embryo sac development arrest 7 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleolar protein 10 0.0
N-terminus
sp_v2.0_unigene13010 SustainPine v2.0 558
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: beach domain-containing protein lvsa-like 0.0
Internal
sp_v2.0_unigene13060 SustainPine v2.0 793
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: transducin wd-40 repeat-containing protein 0.0
Internal
sp_v2.0_unigene13074 SustainPine v2.0 807
AutoFact: Beige/BEACH and WD40 domain-containing protein n=2 Tax=Arabidopsis thaliana RepID=F4JHT3_ARATH 0.0
FL-Next: tr=Beige/BEACH and WD40 domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene13105 SustainPine v2.0 1749
AutoFact: peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] gb|AAM13295.1| peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase-like 2-like 0.0
Complete
sp_v2.0_unigene13112 SustainPine v2.0 721
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAB51411.1| putative protein [Arabidopsis thaliana] emb|CAB81228.1| putative protein [Arabidopsis thaliana] gb|AEE82991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 1.10141e-27
Internal
sp_v2.0_unigene13165 SustainPine v2.0 1913
AutoFact: pfam00400, WD40, WD domain, G-beta repeat 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain