Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene85029 SustainPine v2.0 595
AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat family protein 0.0
Internal
sp_v2.0_unigene85169 SustainPine v2.0 440
AutoFact: WD-repeat protein, putative 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.45865e-09
N-terminus
sp_v2.0_unigene85399 SustainPine v2.0 854
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 6.76405e-17
C-terminus
sp_v2.0_unigene85717 SustainPine v2.0 613
AutoFact: RecName: Full=50S ribosomal protein L27, chloroplastic; AltName: Full=CL27; Flags: Precursor gb|AAA34104.1| ribosomal protein L27 [Nicotiana tabacum] gb|AAA34115.1| ribosomal protein L27 [Nicotiana tabacum] 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l27 0.0
Putative Complete
sp_v2.0_unigene85817 SustainPine v2.0 286
AutoFact: Topless-related protein 1 [Arabidopsis thaliana] sp|Q0WV90.3|TPR1_ARATH RecName: Full=Topless-related protein 1; AltName: Full=Protein MODIFIER OF SNC1 10 gb|AEE36412.1| Topless-related protein 1 [Arabidopsis thaliana] 2.0e-13
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 4.73025e-15
Internal
sp_v2.0_unigene85832 SustainPine v2.0 1028
AutoFact: embryo sac development arrest 7 protein [Arabidopsis thaliana] emb|CAB72169.1| putative protein [Arabidopsis thaliana] gb|AAL47467.1| AT3g56990/F24I3_70 [Arabidopsis thaliana] gb|AEE79596.1| embryo sac development arrest 7 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleolar protein 10 0.0
Internal
sp_v2.0_unigene85849 SustainPine v2.0 474
AutoFact: WD domain, G-beta repeat containing protein [Oryza sativa Japonica Group] 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene85853 SustainPine v2.0 1004
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene85855 SustainPine v2.0 352
AutoFact: WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana] emb|CAB96849.1| putative protein [Arabidopsis thaliana] gb|AED91612.1| WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana] 7.0e-11
FL-Next: tr=Putative uncharacterized protein T30N20_210; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd and tetratricopeptide repeats protein 1 2.93298e-12
Internal
sp_v2.0_unigene86095 SustainPine v2.0 514
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9S6L1_RICCO 5.0e-33
FL-Next: sp=F-box/WD-40 repeat-containing protein At5g21040; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein 2 9.10983e-33
C-terminus
sp_v2.0_unigene86122 SustainPine v2.0 409
AutoFact: WD-40 repeat family protein 6.0e-11
FL-Next: tr=WD-40 repeat family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: wd-40 repeat family protein 3.12638e-13
Putative C-terminus
sp_v2.0_unigene86162 SustainPine v2.0 475
AutoFact: putative WD-40 repeat protein [Oryza sativa Japonica Group] 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ddb1- and cul4-associated factor 8-like 1.4013e-45
Internal
sp_v2.0_unigene86441 SustainPine v2.0 1363
AutoFact: 60S ribosomal protein L21 n=9 Tax=Poaceae RepID=Q9AV87_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 0.0
Complete
sp_v2.0_unigene91393 SustainPine v2.0 779
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing 0.0
Putative N-terminus
sp_v2.0_unigene92320 SustainPine v2.0 1831
AutoFact: Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] gb|EAQ39883.1| Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phosphoenolpyruvate carboxykinase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain