Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene82531 SustainPine v2.0 673
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene82546 SustainPine v2.0 482
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene82547 SustainPine v2.0 575
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 0.0
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene82698 SustainPine v2.0 408
AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.48218e-38
C-terminus
sp_v2.0_unigene82740 SustainPine v2.0 843
AutoFact: eukaryotic initiation factor 4A [Oryza sativa Japonica Group] dbj|BAB21260.1| eukaryotic initiation factor 4A [Oryza sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene82771 SustainPine v2.0 481
AutoFact: RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A; AltName: Full=ATP-dependent RNA helicase eIF4A 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.35117e-27
N-terminus
sp_v2.0_unigene82825 SustainPine v2.0 518
AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.01773e-16
C-terminus
sp_v2.0_unigene82842 SustainPine v2.0 1030
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 1.0e-34
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 1.4013e-45
Putative C-terminus
sp_v2.0_unigene82903 SustainPine v2.0 843
AutoFact: Topless-related 2 protein [Arabidopsis thaliana] sp|Q9LRZ0.2|TPR2_ARATH RecName: Full=Topless-related protein 2 gb|AEE75871.1| Topless-related 2 protein [Arabidopsis thaliana] 1.0e-28
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 7.50837e-34
Putative C-terminus
sp_v2.0_unigene82953 SustainPine v2.0 569
AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q17U56_SOLBU 2.0e-14
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ramosa 1 enhancer locus 2 1.35286e-13
Putative C-terminus
sp_v2.0_unigene83068 SustainPine v2.0 582
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: protein 3.89601e-23
Internal
sp_v2.0_unigene83093 SustainPine v2.0 720
AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.48664e-41
Putative Complete
sp_v2.0_unigene83102 SustainPine v2.0 309
AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q17U56_SOLBU 2.0e-17
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: topless-related protein 1-like 1.92822e-20
Internal
sp_v2.0_unigene83104 SustainPine v2.0 516
AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 5.0e-16
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 1.83579e-20
Putative C-terminus
sp_v2.0_unigene83109 SustainPine v2.0 318
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.32735e-15
Internal
sp_v2.0_unigene83111 SustainPine v2.0 466
AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 2.0e-19
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 6.52944e-19
Internal
sp_v2.0_unigene83608 SustainPine v2.0 472
AutoFact: Eukaryotic translation initiation factor 5A 4 n=1 Tax=Picea abies RepID=Q3ZDK5_PICAB 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: eukaryotic translation initiation factor 5a isoform iv 0.0
N-terminus
sp_v2.0_unigene83763 SustainPine v2.0 887
AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: eukaryotic translation initiation factor 5a 0.0
Putative Complete
sp_v2.0_unigene83772 SustainPine v2.0 403
AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 1.0e-32
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: eukaryotic translation initiation factor 5a 1.37065e-34
Putative C-terminus
sp_v2.0_unigene84080 SustainPine v2.0 997
AutoFact: Guanine nucleotide-binding protein subunit beta-like protein n=4 Tax=rosids RepID=GBLP_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: guanine nucleotide-binding protein subunit beta-like protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain