Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene18872 SustainPine v2.0 366
AutoFact: PREDICTED: WD repeat-containing protein 18-like [Monodelphis domestica] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 5.98843e-26
Putative N-terminus
sp_v2.0_unigene18907 SustainPine v2.0 601
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAM13156.1| unknown protein [Arabidopsis thaliana] gb|AAN15609.1| unknown protein [Arabidopsis thaliana] gb|AEE29984.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 9.0e-14
FL-Next: sp=WD repeat-containing protein DWA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transducin family protein 1.89164e-16
C-terminus
sp_v2.0_unigene19057 SustainPine v2.0 2153
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana] gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana] gb|AED92689.1| RNA recognition motif-containing 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized rna-binding isoform 1 0.0
Complete
sp_v2.0_unigene19222 SustainPine v2.0 1094
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9T1J5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleotide binding 0.0
Internal
sp_v2.0_unigene19251 SustainPine v2.0 889
AutoFact: Ataxia telangiectasia mutated, putative n=1 Tax=Ricinus communis RepID=B9RB21_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-protein kinase atm 0.0
Putative Complete
sp_v2.0_unigene19430 SustainPine v2.0 2370
AutoFact: protein pleiotropic regulatory locus 1 [Arabidopsis thaliana] sp|Q42384.1|PRL1_ARATH RecName: Full=Protein pleiotropic regulatory locus 1; Short=Protein PRL1; AltName: Full=MOS4-associated complex protein 2; Short=MAC protein 2 emb|CAA58031.1| PRL1 [Arabi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein pleiotropic regulatory locus 1-like 0.0
Complete
sp_v2.0_unigene19618 SustainPine v2.0 2536
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB02026.1| unnamed protein product [Arabidopsis thaliana] gb|AAM65008.1| WD-repeat protein, putative [Arabidopsis thaliana] gb|AAN86145.1| putative WD-repeat protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein lst8 homolog 0.0
Complete
sp_v2.0_unigene19620 SustainPine v2.0 510
AutoFact: putative cinnamoyl-CoA reductase [Oryza sativa Japonica Group] 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.22869e-33
Internal
sp_v2.0_unigene19675 SustainPine v2.0 767
AutoFact: WD-40 repeat protein-like (Fragment) n=1 Tax=Populus suaveolens RepID=Q1HIU4_9ROSI 2.0e-36
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.78877e-33
Internal
sp_v2.0_unigene19830 SustainPine v2.0 1943
AutoFact: WD repeat and SOF domain-containing protein 1 [Arabidopsis thaliana] gb|AAK50083.1|AF372943_1 AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAK73982.1| AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAN28840.1| At4g28450/F20O9_130 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ddb1- and cul4-associated factor 0.0
Complete
sp_v2.0_unigene19868 SustainPine v2.0 1846
AutoFact: Fertilization-independent endosperm (Fragment) n=2 Tax=Hieracium RepID=B1ABR5_HIEPL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fertilization-independent endosperm protein 0.0
Complete
sp_v2.0_unigene20277 SustainPine v2.0 1782
AutoFact: cellulose synthase-like protein CslE [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellulose synthase-like protein e6-like 0.0
C-terminus
sp_v2.0_unigene20382 SustainPine v2.0 337
AutoFact: Pyridoxal phosphate-dependent transferase domain-containing protein [Arabidopsis thaliana] gb|AAG12531.1|AC015446_12 Similar to Allinase [Arabidopsis thaliana] gb|AEE31667.1| Pyridoxal phosphate-dependent transferase domain-containing protein [Arabidopsis 1.0e-12
FL-Next: sp=Tryptophan aminotransferase-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tryptophan aminotransferase-related protein 4-like 1.63407e-19
Internal
sp_v2.0_unigene20390 SustainPine v2.0 920
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SA71_RICCO 0.0
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: retinoblastoma-binding protein 5-like 0.0
Internal
sp_v2.0_unigene20582 SustainPine v2.0 325
AutoFact: Beta transducin-like protein, putative [Solanum bulbocastanum] 6.0e-28
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 8.97972e-33
Internal
sp_v2.0_unigene20697 SustainPine v2.0 1982
AutoFact: RecName: Full=Vacuolar protein sorting-associated protein 41 homolog gb|AAB60857.1| VPS41 [Solanum lycopersicum] 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: vacuolar protein sorting-associated protein 41 homolog 0.0
C-terminus
sp_v2.0_unigene20877 SustainPine v2.0 858
AutoFact: Charged multivesicular body protein 4b, putative n=4 Tax=rosids RepID=B9RKD5_RICCO 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar protein sorting-associated protein 32-2 0.0
Complete
sp_v2.0_unigene20903 SustainPine v2.0 1434
AutoFact: Phosphorylase-like protein protein [Arabidopsis thaliana] gb|AEE85565.1| Phosphorylase-like protein protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bark storage protein a-like 0.0
Complete
sp_v2.0_unigene20944 SustainPine v2.0 742
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 7.0e-05
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional corepressor leunig 3.10352e-31
Internal
sp_v2.0_unigene20978 SustainPine v2.0 880
AutoFact: WD40 repeat protein [Ipomoea purpurea] dbj|BAE94399.1| WD40 repeat protein [Ipomoea nil] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain