Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene85849 SustainPine v2.0 474
AutoFact: WD domain, G-beta repeat containing protein [Oryza sativa Japonica Group] 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene85853 SustainPine v2.0 1004
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene85855 SustainPine v2.0 352
AutoFact: WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana] emb|CAB96849.1| putative protein [Arabidopsis thaliana] gb|AED91612.1| WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana] 7.0e-11
FL-Next: tr=Putative uncharacterized protein T30N20_210; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd and tetratricopeptide repeats protein 1 2.93298e-12
Internal
sp_v2.0_unigene86021 SustainPine v2.0 503
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.36762e-31
C-terminus
sp_v2.0_unigene86027 SustainPine v2.0 725
AutoFact: WD40 repeat protein (ISS) [Ostreococcus tauri] emb|CAL54822.1| WD40 repeat protein (ISS) [Ostreococcus tauri] 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: quinoprotein amine beta chain-like ric1-like guanyl-nucleotide exchange factor 0.0
Internal
sp_v2.0_unigene86050 SustainPine v2.0 492
AutoFact: WS00724.B21_K22 WS-PS-N-A-8 Picea glauca cDNA clone WS00724_K22 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene86095 SustainPine v2.0 514
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9S6L1_RICCO 5.0e-33
FL-Next: sp=F-box/WD-40 repeat-containing protein At5g21040; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein 2 9.10983e-33
C-terminus
sp_v2.0_unigene86122 SustainPine v2.0 409
AutoFact: WD-40 repeat family protein 6.0e-11
FL-Next: tr=WD-40 repeat family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: wd-40 repeat family protein 3.12638e-13
Putative C-terminus
sp_v2.0_unigene86162 SustainPine v2.0 475
AutoFact: putative WD-40 repeat protein [Oryza sativa Japonica Group] 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ddb1- and cul4-associated factor 8-like 1.4013e-45
Internal
sp_v2.0_unigene86441 SustainPine v2.0 1363
AutoFact: 60S ribosomal protein L21 n=9 Tax=Poaceae RepID=Q9AV87_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 0.0
Complete
sp_v2.0_unigene91393 SustainPine v2.0 779
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing 0.0
Putative N-terminus
sp_v2.0_unigene91872 SustainPine v2.0 413
AutoFact: Breast carcinoma amplified sequence, putative n=1 Tax=Ricinus communis RepID=B9REZ6_RICCO 3.0e-32
FL-Next: tr=Breast carcinoma amplified sequence, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 5.30266e-37
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain