Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene110 SustainPine v2.0 1934
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AAK95259.1|AF410273_1 AT3g54360/T12E18_50 [Arabidopsis thaliana] emb|CAB81801.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM63273.1| RING finger-like protein [Arabidopsis thaliana] gb|AAN18187. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: binding protein 0.0
Putative Complete
sp_v2.0_unigene191 SustainPine v2.0 2479
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
Complete
sp_v2.0_unigene285 SustainPine v2.0 1464
AutoFact: RING-H2 finger protein ATL58 [Arabidopsis thaliana] sp|Q570X5.1|ATL58_ARATH RecName: Full=RING-H2 finger protein ATL58 dbj|BAD94869.1| hypothetical protein [Arabidopsis thaliana] gb|AEE31599.1| RING-H2 finger protein ATL58 [Arabidopsis thaliana] 7.0e-34
FL-Next: tr=Putative uncharacterized protein Sb04g022820; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: ring-h2 finger protein atl7-like 0.0
Complete
sp_v2.0_unigene296 SustainPine v2.0 2835
AutoFact: DNA-binding protein-like [Arabidopsis thaliana] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase COP1; Pisum sativum (Garden pea). 0.0
Blast2go: retinoblastoma-binding protein 0.0
Putative Complete
sp_v2.0_unigene306 SustainPine v2.0 1281
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SWK7_PHYPA 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene314 SustainPine v2.0 3017
AutoFact: U-box multi-domain protein 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene332 SustainPine v2.0 1905
AutoFact: Heterogeneous nuclear ribonucleoprotein 27C, putative n=1 Tax=Ricinus communis RepID=B9SSS5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene401 SustainPine v2.0 1981
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Putative Complete
sp_v2.0_unigene456 SustainPine v2.0 1704
AutoFact: ring zinc finger protein [Artemisia desertorum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase xb3-like 0.0
Complete
sp_v2.0_unigene467 SustainPine v2.0 2337
AutoFact: Zinc finger, C3HC4 type family protein n=3 Tax=Andropogoneae RepID=B6SSJ0_MAIZE 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.79632e-16
C-terminus
sp_v2.0_unigene472 SustainPine v2.0 2246
AutoFact: protease-associated and C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] gb|AAL38826.1| unknown protein [Arabidopsis thaliana] gb|AAM91777.1| unknown protein [Arabidopsis thaliana] gb|AEE35260.1| protease-associated and C3HC4-type R 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rnf167-like 0.0
Complete
sp_v2.0_unigene484 SustainPine v2.0 2709
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R6Q1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
C-terminus
sp_v2.0_unigene497 SustainPine v2.0 1578
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Putative Complete
sp_v2.0_unigene527 SustainPine v2.0 869
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein skip5 0.0
C-terminus
sp_v2.0_unigene591 SustainPine v2.0 2222
AutoFact: putative kinesin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin heavy chain 0.0
Putative Complete
sp_v2.0_unigene611 SustainPine v2.0 1524
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAK96689.1| Unknown protein [Arabidopsis thaliana] gb|AAP37763.1| At1g04790 [Arabidopsis thaliana] gb|AEE27744.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene617 SustainPine v2.0 1471
AutoFact: [R] COG2319 FOG: WD40 repeat 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: photomorphogenesis repressor protein 0.0
C-terminus
sp_v2.0_unigene622 SustainPine v2.0 1877
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAR92268.1| At1g47570 [Arabidopsis thaliana] gb|AAS99681.1| At1g47570 [Arabidopsis thaliana] gb|AEE32187.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Complete
sp_v2.0_unigene628 SustainPine v2.0 3947
AutoFact: Cellulose synthase catalytic subunit n=2 Tax=Pinus RepID=Q5DI93_PINTA 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Complete
sp_v2.0_unigene645 SustainPine v2.0 4499
AutoFact: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] ref|NP_001117233.1| Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] gb|AAF79721.1|AC005106_2 T25N20.3 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain