Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4010 SustainPine v2.0 2682
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RS95_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase at4g11680-like 0.0
Complete
sp_v2.0_unigene4041 SustainPine v2.0 1514
AutoFact: S-ribonuclease binding protein SBP1, putative [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: s-ribonuclease binding protein sbp1 0.0
Complete
sp_v2.0_unigene4100 SustainPine v2.0 1587
AutoFact: homeobox protein HAT3.1 [Arabidopsis thaliana] sp|Q04996.3|HAT31_ARATH RecName: Full=Homeobox protein HAT3.1 dbj|BAC41784.1| putative homeobox protein HAT3.1 [Arabidopsis thaliana] gb|AAO64900.1| At3g19510 [Arabidopsis thaliana] gb|AEE76250.1| homeobox pr 0.0
FL-Next: sp=Homeobox protein HAT3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: homeobox protein 0.0
N-terminus
sp_v2.0_unigene4164 SustainPine v2.0 2072
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: helicase and zinc finger domain-containing protein 0.0
Putative Complete
sp_v2.0_unigene4200 SustainPine v2.0 723
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: e3 ubiquitin-protein ligase rf298-like 1.83047e-11
Internal
sp_v2.0_unigene4232 SustainPine v2.0 2491
AutoFact: Tyrosine specific protein phosphatase family protein n=2 Tax=Zea mays RepID=B6TFU8_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tyrosine specific protein phosphatase family protein 0.0
Complete
sp_v2.0_unigene4274 SustainPine v2.0 1133
AutoFact: putative zinc finger protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase ring1a-like 0.0
N-terminus
sp_v2.0_unigene4281 SustainPine v2.0 944
AutoFact: zinc transporter, putative [Asparagus officinalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc transporter 0.0
C-terminus
sp_v2.0_unigene4284 SustainPine v2.0 1998
AutoFact: putative methyltransferase PMT6 [Arabidopsis thaliana] sp|Q84TJ0.1|PMT6_ARATH RecName: Full=Probable methyltransferase PMT6 gb|AAO64151.1| unknown protein [Arabidopsis thaliana] dbj|BAF00512.1| hypothetical protein [Arabidopsis thaliana] gb|AEE74871.1| pu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable methyltransferase pmt7-like 0.0
Putative Complete
sp_v2.0_unigene4287 SustainPine v2.0 1803
AutoFact: putative protein phosphatase 2C 63 [Arabidopsis thaliana] sp|O81760.1|P2C63_ARATH RecName: Full=Probable protein phosphatase 2C 63; Short=AtPP2C63 gb|AAK50092.1|AF372953_1 AT4g33920/F17I5_110 [Arabidopsis thaliana] emb|CAA19874.1| putative protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable protein phosphatase 2c 63-like 0.0
Complete
sp_v2.0_unigene4344 SustainPine v2.0 968
AutoFact: pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl4 0.0
Complete
sp_v2.0_unigene4359 SustainPine v2.0 1493
AutoFact: FANCL_C multi-domain protein 3.0e-06
FL-Next: sp=E3 ubiquitin-protein ligase listerin; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene4376 SustainPine v2.0 2514
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Complete
sp_v2.0_unigene4462 SustainPine v2.0 1319
AutoFact: Zinc finger family-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZH37_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family-like protein 0.0
Complete
sp_v2.0_unigene4471 SustainPine v2.0 1118
AutoFact: RING-H2 finger protein ATL40 [Arabidopsis thaliana] sp|Q9SLC4.1|ATL40_ARATH RecName: Full=RING-H2 finger protein ATL40 gb|AAD23718.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAR24220.1| At2g42350 [Arabidopsis thaliana] gb|AAR92359.1| A 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene4503 SustainPine v2.0 1498
AutoFact: Cellulose synthase-like protein n=2 Tax=Populus RepID=B9IPJ4_POPTR 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase-like protein 0.0
C-terminus
sp_v2.0_unigene4525 SustainPine v2.0 1102
AutoFact: Putative zinc transporter n=1 Tax=Solanum lycopersicum RepID=A1YIQ6_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc transporter 0.0
C-terminus
sp_v2.0_unigene4588 SustainPine v2.0 2153
AutoFact: MAD domain containing protein 3.0e-05
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene4606 SustainPine v2.0 689
AutoFact: Ubiquitin-protein ligase n=1 Tax=Cucumis melo subsp. melo RepID=E5GC73_CUCME 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: upf0392 protein rcom_0530710-like 4.56779e-33
C-terminus
sp_v2.0_unigene4725 SustainPine v2.0 3002
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain