Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene85821 SustainPine v2.0 546
• AutoFact: Unassigned protein
• FL-Next: sp=E3 ubiquitin-protein ligase XB3; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: e3 ubiquitin-protein ligase xbat31 5.46518e-20
C-terminus
sp_v2.0_unigene85841 SustainPine v2.0 892
• AutoFact: RING-H2 finger protein RHG1a-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7R4_ORYSJ 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: ring finger 2.88329e-25
Putative C-terminus
sp_v2.0_unigene85853 SustainPine v2.0 1004
• AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene85898 SustainPine v2.0 722
• AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] gb|AAK44172.1|AF370357_1 unknown protein [Arabidopsis thaliana] gb|AAL15193.1| unknown protein [Arabidopsis thaliana] gb|AAM61248.1| unknown [Arabidopsis thaliana] gb|AEE35285.1| C3HC4-type RING finger 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: c3hc4-type ring finger protein 0.0
N-terminus
sp_v2.0_unigene85971 SustainPine v2.0 537
• AutoFact: RING-finger domain protein [Zinnia violacea] 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.53765e-37
Internal
sp_v2.0_unigene85976 SustainPine v2.0 416
• AutoFact: ubiquitin ligase SINAT5-related (seven in absentia protein family) [Musa balbisiana] 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.24208e-44
C-terminus
sp_v2.0_unigene85999 SustainPine v2.0 1133
• AutoFact: zinc ion binding 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
N-terminus
sp_v2.0_unigene86080 SustainPine v2.0 387
• AutoFact: C3HC4-type RING finger-containing protein n=3 Tax=Arabidopsis thaliana RepID=F4IU12_ARATH 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: c3hc4-type ring finger protein 1.01375e-37
Internal
sp_v2.0_unigene86546 SustainPine v2.0 996
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 6.8224e-37
N-terminus
sp_v2.0_unigene88442 SustainPine v2.0 501
• AutoFact: putative peroxin [Oryza sativa Japonica Group] 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.75232e-19
Internal
sp_v2.0_unigene89497 SustainPine v2.0 284
• AutoFact: SINA [Phyllostachys praecox] 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin ligase 1.38583e-38
Internal
sp_v2.0_unigene90533 SustainPine v2.0 486
• AutoFact: Ring finger and CHY zinc finger domain-containing protein 1 n=4 Tax=Arabidopsis RepID=F4IZL5_ARATH 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.29222e-34
Internal
sp_v2.0_unigene90913 SustainPine v2.0 760
• AutoFact: DUF248 domain containing protein 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene90922 SustainPine v2.0 298
• AutoFact: Unassigned protein
• FL-Next: sp=Peroxisome biogenesis protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v2.0_unigene91004 SustainPine v2.0 380
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 7.4081e-25
N-terminus
sp_v2.0_unigene91162 SustainPine v2.0 1765
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene91189 SustainPine v2.0 525
• AutoFact: RING-H2 zinc finger protein [Cucumis melo] 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
C-terminus
sp_v2.0_unigene91272 SustainPine v2.0 427
• AutoFact: Copine III-like protein (Fragment) n=1 Tax=Picea abies RepID=B2KZF7_PICAB 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rglg2-like 0.0
C-terminus
sp_v2.0_unigene91276 SustainPine v2.0 721
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF23258.1|AC015985_16 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAF23312.1|AC016661_37 unknown protein [Arabidopsis thaliana] gb|AAL66972.1| putative RING zinc finger protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase mgrn1-like 0.0
Internal
sp_v2.0_unigene91304 SustainPine v2.0 566
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain