Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2877 SustainPine v2.0 2647
AutoFact: C3H4 type zinc finger protein [Arabidopsis thaliana] gb|AAL66968.1| unknown protein [Arabidopsis thaliana] gb|AAL91189.1| putative protein [Arabidopsis thaliana] gb|AAM20289.1| unknown protein [Arabidopsis thaliana] gb|AEE86087.1| C3H4 type zinc finger pr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene2918 SustainPine v2.0 1578
AutoFact: E3 ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName: Full=RING finger protein At4g11680 gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana] gb|AAR23720.1| At4g11680/ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene2955 SustainPine v2.0 1593
AutoFact: Zinc finger, RING-type [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene3059 SustainPine v2.0 2300
AutoFact: kinesin-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene3129 SustainPine v2.0 3521
AutoFact: Cellulose synthase catalytic subunit n=1 Tax=Pinus taeda RepID=Q5DI94_PINTA 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase 0.0
Complete
sp_v2.0_unigene3157 SustainPine v2.0 1478
AutoFact: transcription factor jumonji domain-containing protein [Arabidopsis thaliana] dbj|BAH30353.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33952.1| transcription factor jumonji domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene3259 SustainPine v2.0 1096
AutoFact: vacuolar protein sorting 11 protein [Arabidopsis thaliana] gb|AAL32006.1|AF436824_1 At2g05170/F5G3.7 [Arabidopsis thaliana] gb|AAD29055.1| expressed protein [Arabidopsis thaliana] gb|AAO11614.1| At2g05170/F5G3.7 [Arabidopsis thaliana] gb|AEC05900.1| vacuo 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vacuolar protein sorting-associated protein 11 homolog 0.0
Internal
sp_v2.0_unigene3328 SustainPine v2.0 1215
AutoFact: ubiquitin-protein ligase RNF25 [Arabidopsis thaliana] gb|AAY57602.1| RING finger family protein [Arabidopsis thaliana] gb|AEE80040.1| ubiquitin-protein ligase RNF25 [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=RING finger protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: ubiquitin-protein ligase rnf25 0.0
C-terminus
sp_v2.0_unigene3364 SustainPine v2.0 1608
AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene3372 SustainPine v2.0 1688
AutoFact: C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] dbj|BAB09828.1| unnamed protein product [Arabidopsis thaliana] gb|AED93123.1| C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: c3hc4-type ring finger domain-containing protein 0.0
C-terminus
sp_v2.0_unigene3496 SustainPine v2.0 2146
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Putative Complete
sp_v2.0_unigene3614 SustainPine v2.0 1162
AutoFact: putative PHD zinc finger protein [Ipomoea trifida] dbj|BAF36299.1| hypothetical protein [Ipomoea trifida] 0.0
FL-Next: tr=Putative uncharacterized protein At2g37520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 0.0
Internal
sp_v2.0_unigene3631 SustainPine v2.0 1544
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGI2.1|Y1677_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g67720; Flags: Precursor gb|ACN59267.1| leucine-rich repeat receptor-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g67720-like 0.0
Putative C-terminus
sp_v2.0_unigene3638 SustainPine v2.0 1649
AutoFact: JmjC domain containing protein 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor jumonji domain-containing protein 0.0
Putative Complete
sp_v2.0_unigene3642 SustainPine v2.0 1475
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUV3_RICCO 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.31492e-35
C-terminus
sp_v2.0_unigene3648 SustainPine v2.0 1280
AutoFact: 7-fold repeat in clathrin and VPS proteins repeat-containing protein [Dictyostelium discoideum AX4] gb|EAL72312.1| 7-fold repeat in clathrin and VPS proteins repeat-containing protein [Dictyostelium discoideum AX4] 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vacuolar protein sorting-associated protein 18 homolog 0.0
C-terminus
sp_v2.0_unigene3790 SustainPine v2.0 1388
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene3795 SustainPine v2.0 1688
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger 0.0
Complete
sp_v2.0_unigene3848 SustainPine v2.0 4270
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene3880 SustainPine v2.0 1606
AutoFact: DNA binding; K10639 E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain