Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene67888 SustainPine v2.0 642
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase a catalytic subunit 3 0.0
C-terminus
sp_v2.0_unigene68262 SustainPine v2.0 421
AutoFact: cellulose synthase 5 [Physcomitrella patens] 2.0e-40
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene68318 SustainPine v2.0 338
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 2.19988e-40
Putative C-terminus
sp_v2.0_unigene68503 SustainPine v2.0 440
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N1U4_POPTR 4.0e-35
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Blast2go: e3 ubiquitin-protein ligase shprh-like 7.72445e-35
Internal
sp_v2.0_unigene68553 SustainPine v2.0 491
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 8.40779e-45
Putative C-terminus
sp_v2.0_unigene68568 SustainPine v2.0 208
AutoFact: Synaptonemal complex protein, putative n=1 Tax=Ricinus communis RepID=B9S1H3_RICCO 8.0e-11
FL-Next: tr=Synaptonemal complex protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: e3 ubiquitin-protein ligase rf298-like 1.06452e-11
Internal
sp_v2.0_unigene68645 SustainPine v2.0 396
AutoFact: putative zinc finger protein [Oryza sativa Japonica Group] 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger 8.30269e-42
Internal
sp_v2.0_unigene68689 SustainPine v2.0 422
AutoFact: PREDICTED: similar to deltex 2 [Strongylocentrotus purpuratus] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase dtx3l-like 0.0
Internal
sp_v2.0_unigene68743 SustainPine v2.0 513
AutoFact: LIM2 transcription factor (Fragment) n=2 Tax=Pinaceae RepID=B1PPT4_PINPS 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gata type zinc finger transcription factor-like protein 0.0
Putative Complete
sp_v2.0_unigene68809 SustainPine v2.0 330
AutoFact: RING finger and CHY zinc finger domain-containing protein 1 n=2 Tax=Zea mays RepID=B6T4N6_MAIZE 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger and chy zinc finger domain-containing protein 1 1.52761e-23
Internal
sp_v2.0_unigene68876 SustainPine v2.0 556
AutoFact: Unassigned protein
FL-Next: sp=E3 ubiquitin-protein ligase XB3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: e3 ubiquitin-protein ligase xbat31-like 2.75813e-37
Putative C-terminus
sp_v2.0_unigene68939 SustainPine v2.0 285
AutoFact: putative methyltransferase domain-containing protein [Arabidopsis thaliana] emb|CAB80933.1| hypothetical protein [Arabidopsis thaliana] gb|AEE81998.1| putative methyltransferase domain-containing protein [Arabidopsis thaliana] 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.6372e-37
Internal
sp_v2.0_unigene68944 SustainPine v2.0 385
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 8.47814e-15
N-terminus
sp_v2.0_unigene69110 SustainPine v2.0 644
AutoFact: Lectin-like receptor kinase 7;3 n=1 Tax=Medicago truncatula RepID=Q6UY58_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Putative C-terminus
sp_v2.0_unigene69233 SustainPine v2.0 273
AutoFact: Inorganic diphosphatase, H+-translocating, vacuolar membrane n=15 Tax=Poaceae RepID=Q67WN5_ORYSJ 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 1.0025e-11
Internal
sp_v2.0_unigene69336 SustainPine v2.0 257
AutoFact: Unassigned protein
FL-Next: sp=E3 ubiquitin-protein ligase COP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase cop1 2.77979e-28
Internal
sp_v2.0_unigene69455 SustainPine v2.0 395
AutoFact: cleavage and polyadenylation specificity factor subunit 3-II [Arabidopsis thaliana] sp|Q8GUU3.2|CPS3B_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 3-II; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa su 4.0e-20
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-II; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity 1.63297e-31
Internal
sp_v2.0_unigene69774 SustainPine v2.0 456
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein binding 8.13557e-18
Internal
sp_v2.0_unigene70124 SustainPine v2.0 675
AutoFact: PREDICTED: e3 ubiquitin-protein ligase DTX3L-like isoform 3 [Macaca mulatta] 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase dtx3l-like 5.06009e-42
Putative Complete
sp_v2.0_unigene70135 SustainPine v2.0 390
AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lim domain-containing protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain