Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene66023 SustainPine v2.0 442
AutoFact: Unassigned protein
unknown
sp_v2.0_unigene66115 SustainPine v2.0 661
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SMC2_RICCO 2.0e-38
FL-Next: tr=Protein binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein binding 3.61535e-43
Internal
sp_v2.0_unigene66381 SustainPine v2.0 568
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SCJ9_RICCO 7.00649e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 1.32283e-42
Internal
sp_v2.0_unigene66401 SustainPine v2.0 443
AutoFact: RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo] 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene66487 SustainPine v2.0 430
AutoFact: PREDICTED: similar to vacuolar protein sorting protein 18 [Nasonia vitripennis] 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vacuolar protein sorting-associated protein 18 homolog 0.0
Internal
sp_v2.0_unigene66570 SustainPine v2.0 430
AutoFact: la62f09.g1 Cycas ovule - normalized (NYBG) Cycas rumphii cDNA 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: organelle transcript processing 82 0.0
Internal
sp_v2.0_unigene66607 SustainPine v2.0 546
AutoFact: E3 ubiquitin-protein ligase BAH1 [Arabidopsis thaliana] sp|Q9SRX9.1|BAH1_ARATH RecName: Full=E3 ubiquitin-protein ligase BAH1; AltName: Full=Protein BENZOIC ACID HYPERSENSITIVE 1; AltName: Full=Protein NITROGEN LIMITATION ADAPTATION gb|AAF02879.1|AC009525 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase bah1 0.0
C-terminus
sp_v2.0_unigene66980 SustainPine v2.0 481
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.36114e-19
N-terminus
sp_v2.0_unigene67079 SustainPine v2.0 455
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene67097 SustainPine v2.0 534
AutoFact: Os09g0327200 protein n=4 Tax=Oryza sativa RepID=Q0J2K9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at4g02750-like 0.0
Internal
sp_v2.0_unigene67167 SustainPine v2.0 348
AutoFact: E3 ubiquitin-protein ligase BAH1 [Arabidopsis thaliana] sp|Q9SRX9.1|BAH1_ARATH RecName: Full=E3 ubiquitin-protein ligase BAH1; AltName: Full=Protein BENZOIC ACID HYPERSENSITIVE 1; AltName: Full=Protein NITROGEN LIMITATION ADAPTATION gb|AAF02879.1|AC009525 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 9.80467e-16
C-terminus
sp_v2.0_unigene67509 SustainPine v2.0 470
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase ino80 complex-like 1 0.0
Internal
sp_v2.0_unigene67531 SustainPine v2.0 507
AutoFact: cellulose synthase-like protein CslE [Nicotiana tabacum] 8.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellulose synthase-like protein e6-like 0.0
Internal
sp_v2.0_unigene67583 SustainPine v2.0 601
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RS80_RICCO 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chy and ctchy and ring-type zinc finger protein 0.0
Internal
sp_v2.0_unigene67652 SustainPine v2.0 361
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein chloroplast 8.89514e-39
Putative N-terminus
sp_v2.0_unigene67721 SustainPine v2.0 453
AutoFact: cohesin loading factor subunit SCC2 [Arabidopsis thaliana] gb|ABQ12620.1| sister chromatid cohesion 2 [Arabidopsis thaliana] gb|AED92174.1| cohesin loading factor subunit SCC2 [Arabidopsis thaliana] 1.0e-22
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: cohesin loading factor subunit scc2 6.63114e-30
Internal
sp_v2.0_unigene67731 SustainPine v2.0 418
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAG52430.1|AC018848_1 putative RING zinc finger protein; 53384-54880 [Arabidopsis thaliana] gb|AAL32923.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAN15389.1| putative RING 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: e3 ubiquitin-protein ligase at4g11680-like 3.85781e-15
Internal
sp_v2.0_unigene67846 SustainPine v2.0 261
AutoFact: CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] gb|AED93463.1| CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chy and ctchy and ring-type zinc finger protein 1.63334e-28
Internal
sp_v2.0_unigene67851 SustainPine v2.0 194
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AEE32188.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: ring u-box domain-containing protein 8.22954e-17
Internal
sp_v2.0_unigene67867 SustainPine v2.0 375
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9RVY6_RICCO 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: concanavalin a-like lectin kinase-like protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain