Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene63768 SustainPine v2.0 696
• AutoFact: ring finger and CHY zinc finger domain-containing protein 1 [Arabidopsis thaliana] dbj|BAB10613.1| PGPD14 protein [Arabidopsis thaliana] gb|AAK96553.1| AT5g22920/MRN17_15 [Arabidopsis thaliana] gb|AAO11551.1| At5g22920/MRN17_15 [Arabidopsis thaliana] gb|A 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 1.51026e-26
Putative Complete
sp_v2.0_unigene63797 SustainPine v2.0 430
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene63863 SustainPine v2.0 327
• AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAF64543.1| hypothetical protein [Arabidopsis thaliana] gb|AAT69207.1| hypothetical protein At3g05390 [Arabidopsis thaliana] gb|AEE74232.1| uncharacterized protein [Arabidopsis thaliana] 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: uncharacterized protein 4.97529e-21
C-terminus
sp_v2.0_unigene64326 SustainPine v2.0 677
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RF92_RICCO 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: transcription factor jumonji domain-containing protein 2.30187e-37
Internal
sp_v2.0_unigene64334 SustainPine v2.0 624
• AutoFact: kinesin-like protein [Oryza sativa Japonica Group] 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: kinesin motor family protein 1.50818e-12
C-terminus
sp_v2.0_unigene64372 SustainPine v2.0 335
• AutoFact: Probable cellulose synthase A catalytic subunit 5 [UDP-forming] n=9 Tax=Poaceae RepID=CESA5_ORYSJ 4.0e-15
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: cellulose synthase 5.09364e-18
N-terminus
sp_v2.0_unigene64499 SustainPine v2.0 626
• AutoFact: Pseudouridine synthase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I6V0_POPTR 0.0
• FL-Next: sp=Putative tRNA pseudouridine synthase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: trna pseudouridine synthase-like 0.0
Internal
sp_v2.0_unigene64845 SustainPine v2.0 556
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
Internal
sp_v2.0_unigene64908 SustainPine v2.0 554
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8B0_RICCO 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 4.48661e-12
Internal
sp_v2.0_unigene65087 SustainPine v2.0 420
• AutoFact: E3 ubiquitin ligase-like protein [Arabidopsis thaliana] gb|AAM91555.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAN15327.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD43976.1| unknown protein [Arabidopsis thaliana] 1.4013e-45
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: e3 ubiquitin ligase-like protein 0.0
Putative N-terminus
sp_v2.0_unigene65168 SustainPine v2.0 406
• AutoFact: ring finger and CHY zinc finger domain-containing protein 1 [Arabidopsis thaliana] dbj|BAB10613.1| PGPD14 protein [Arabidopsis thaliana] gb|AAK96553.1| AT5g22920/MRN17_15 [Arabidopsis thaliana] gb|AAO11551.1| At5g22920/MRN17_15 [Arabidopsis thaliana] gb|A 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger and chy zinc finger domain-containing protein 8.87706e-39
Putative N-terminus
sp_v2.0_unigene65197 SustainPine v2.0 487
• AutoFact: pfam00097, zf-C3HC4, Zinc finger, C3HC4 type (RING finger) 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
Internal
sp_v2.0_unigene65215 SustainPine v2.0 499
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tetratricopeptide repeat-like family protein 0.0
Internal
sp_v2.0_unigene65223 SustainPine v2.0 305
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 2.44061e-12
N-terminus
sp_v2.0_unigene65382 SustainPine v2.0 423
• AutoFact: cellulose synthase-like protein E1 [Arabidopsis thaliana] sp|Q8VZK9.1|CSLE1_ARATH RecName: Full=Cellulose synthase-like protein E1; Short=AtCslE1 gb|AAL36396.1| putative cellulose synthase catalytic subunit [Arabidopsis thaliana] dbj|BAE99166.1| putative 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cellulose synthase-like protein e6-like 0.0
Internal
sp_v2.0_unigene65479 SustainPine v2.0 457
• AutoFact: putative E3 ubiquitin-protein ligase ARI1 [Arabidopsis thaliana] sp|Q949V6.1|ARI1_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI1; AltName: Full=ARIADNE-like protein ARI1; AltName: Full=Protein ariadne homolog 1 gb|AAK92801.1| unknown protei 1.0e-15
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: e3 ubiquitin-protein ligase ari1 1.35646e-42
Putative C-terminus
sp_v2.0_unigene65641 SustainPine v2.0 326
• AutoFact: Zinc-finger transcription factor n=1 Tax=Ananas comosus RepID=C0KYN2_ANACO 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 9.08708e-27
N-terminus
sp_v2.0_unigene65746 SustainPine v2.0 477
• AutoFact: Unassigned protein
unknown
sp_v2.0_unigene65781 SustainPine v2.0 466
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
Putative N-terminus
sp_v2.0_unigene65852 SustainPine v2.0 408
• AutoFact: LRR receptor-like serine/threonine-protein kinase RCH1 [Arabidopsis thaliana] sp|C0LGV1.1|RCH1_ARATH RecName: Full=LRR receptor-like serine/threonine-protein kinase RCH1; AltName: Full=Protein ROOT CLAVATA-HOMOLOG1 1; Flags: Precursor gb|ACN59386.1| leuci 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine-threonine protein plant- 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain