Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene674 SustainPine v2.0 3492
AutoFact: DUF221 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene687 SustainPine v2.0 1484
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent helicase rhp16-like 0.0
Internal
sp_v2.0_unigene720 SustainPine v2.0 2059
AutoFact: Zinc finger, RING-type [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rhf2a 0.0
Complete
sp_v2.0_unigene722 SustainPine v2.0 1125
AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 0.0
FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene739 SustainPine v2.0 3172
AutoFact: YDG_SRA multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Complete
sp_v2.0_unigene779 SustainPine v2.0 2036
AutoFact: C3HC4-type RING finger-containing protein [Arabidopsis thaliana] gb|AEC09620.1| C3HC4-type RING finger-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inter-alpha-trypsin inhibitor heavy chain h3 0.0
C-terminus
sp_v2.0_unigene813 SustainPine v2.0 1684
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase atl6-like 0.0
Complete
sp_v2.0_unigene817 SustainPine v2.0 1541
AutoFact: Tymo_45kd_70kd multi-domain protein 8.0e-05
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene871 SustainPine v2.0 2112
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDU7_RICCO 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 7.3696e-31
Putative Complete
sp_v2.0_unigene886 SustainPine v2.0 1947
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20234.1|AC012395_21 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAV85664.1| At3g07120 [Arabidopsis thaliana] gb|AAW78594.1| At3g07120 [Arabidopsis thaliana] gb|AEE74501.1| R 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ring u-box domain-containing protein 2.8495e-36
Complete
sp_v2.0_unigene888 SustainPine v2.0 2087
AutoFact: DUF616 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
sp_v2.0_unigene941 SustainPine v2.0 1337
AutoFact: Ubiquitin; TRAF-like [Medicago truncatula] 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 0.0
Complete
sp_v2.0_unigene987 SustainPine v2.0 1763
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAW80858.1| At5g45290 [Arabidopsis thaliana] gb|AAW80870.1| At5g45290 [Arabidopsis thaliana] gb|AED95227.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
Putative Complete
sp_v2.0_unigene1057 SustainPine v2.0 1293
AutoFact: hercules receptor kinase 2 [Arabidopsis thaliana] sp|Q9SA72.1|Y1357_ARATH RecName: Full=Probable receptor-like protein kinase At1g30570; Flags: Precursor gb|AAD25744.1|AC007060_2 Contains eukaryotic protein kinase domain PF|00069 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like protein kinase at1g30570-like 0.0
Putative C-terminus
sp_v2.0_unigene1073 SustainPine v2.0 1054
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001190848.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAE99787.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85222.1| RING/U-box domain-containing protein [Ar 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.70208e-39
N-terminus
sp_v2.0_unigene1127 SustainPine v2.0 1425
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
Putative Complete
sp_v2.0_unigene1130 SustainPine v2.0 1139
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SCL9_RICCO 1.0e-18
FL-Next: tr=Protein binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: acyl- n-acyltransferase with ring fyve phd-type zinc finger domain-containing protein 2.17577e-19
C-terminus
sp_v2.0_unigene1146 SustainPine v2.0 1346
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8B0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Putative C-terminus
sp_v2.0_unigene1166 SustainPine v2.0 1977
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6X0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl13 0.0
C-terminus
sp_v2.0_unigene1218 SustainPine v2.0 2093
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear protein x1 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain