Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene10208 SustainPine v2.0 716
AutoFact: MAP7 multi-domain protein 3.0e-06
FL-Next: sp=Putative E3 ubiquitin-protein ligase RF298; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase rf298-like 3.5109e-33
C-terminus
sp_v2.0_unigene10314 SustainPine v2.0 862
AutoFact: RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAD54441.1| RING zinc finger protein-like [Oryza sativa Japonica Group] 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger protein 0.0
C-terminus
sp_v2.0_unigene10448 SustainPine v2.0 3947
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene10549 SustainPine v2.0 1048
AutoFact: putative tyrosine-protein phosphatase [Arabidopsis thaliana] sp|Q9ZVN4.1|Y1500_ARATH RecName: Full=Probable tyrosine-protein phosphatase At1g05000 gb|AAC97999.1| ESTs gb|H36249, gb|AA59732 and gb|AA651219 come from this gene [Arabidopsis thaliana] gb|AAO6 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tyrosine specific protein phosphatase family protein 0.0
Putative Complete
sp_v2.0_unigene10564 SustainPine v2.0 509
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100792365 1.15217e-09
N-terminus
sp_v2.0_unigene10655 SustainPine v2.0 593
AutoFact: F-box protein SKIP5 [Arabidopsis thaliana] sp|Q94FT2.1|SKIP5_ARATH RecName: Full=F-box protein SKIP5; AltName: Full=SKP1-interacting partner 5 gb|AAK61345.1|AF347972_1 SKP1-interacting partner 5 [Arabidopsis thaliana] gb|AAM61599.1| SKP1 interacting partn 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein skip5 0.0
Internal
sp_v2.0_unigene10793 SustainPine v2.0 2474
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974453.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974454.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001190122.1| RING/U-box domain-con 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc c3hc4 type family protein 0.0
Complete
sp_v2.0_unigene10795 SustainPine v2.0 3054
AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene10861 SustainPine v2.0 992
AutoFact: pfam12819, Malectin_like, Carbohydrate-binding protein of the ER 3.0e-28
FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: receptor-like protein kinase theseus 1-like 0.0
N-terminus
sp_v2.0_unigene10937 SustainPine v2.0 3494
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVA9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Putative Complete
sp_v2.0_unigene10947 SustainPine v2.0 912
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] dbj|BAC42970.1| putative receptor like protein kinase [Arabidopsis thaliana] gb|ACN59402.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AED97645.1| leuci 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
Blast2go: atp binding protein 0.0
N-terminus
sp_v2.0_unigene10974 SustainPine v2.0 665
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor jumonji domain-containing protein 0.0
N-terminus
sp_v2.0_unigene10994 SustainPine v2.0 1238
AutoFact: RING-H2 finger protein ATL52 [Arabidopsis thaliana] sp|Q9LF64.1|ATL52_ARATH RecName: Full=RING-H2 finger protein ATL52 emb|CAC01904.1| RING-H2 zinc finger protein-like [Arabidopsis thaliana] gb|AED92447.1| RING-H2 finger protein ATL52 [Arabidopsis thalian 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
C-terminus
sp_v2.0_unigene10997 SustainPine v2.0 1410
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
sp_v2.0_unigene11030 SustainPine v2.0 645
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 5.60265e-11
C-terminus
sp_v2.0_unigene11179 SustainPine v2.0 1668
AutoFact: E3 ubiquitin-protein ligase XBAT33 [Arabidopsis thaliana] sp|Q4FE45.1|XB33_ARATH RecName: Full=E3 ubiquitin-protein ligase XBAT33; AltName: Full=Ankyrin repeat domain and RING finger-containing protein XBAT33; AltName: Full=Protein XB3 homolog 3 gb|AAZ140 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase xbat33-like 0.0
Putative Complete
sp_v2.0_unigene11188 SustainPine v2.0 1018
AutoFact: RecName: Full=Probable protein phosphatase 2C 43; Short=OsPP2C43 emb|CAD41383.2| OSJNBa0088A01.23 [Oryza sativa Japonica Group] gb|EAY95304.1| hypothetical protein OsI_17129 [Oryza sativa Indica Group] gb|EAZ31769.1| hypothetical protein OsJ_15921 [Oryza 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.42167e-37
C-terminus
sp_v2.0_unigene11222 SustainPine v2.0 1230
AutoFact: MAD multi-domain protein 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene11271 SustainPine v2.0 1462
AutoFact: IBR domain containing protein 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable e3 ubiquitin-protein ligase rnf144a-like 0.0
Putative Complete
sp_v2.0_unigene11302 SustainPine v2.0 834
AutoFact: Transcription Factor IIF, Rap30/Rap74, interaction [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain