Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene9125 SustainPine v2.0 1088
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983C0B 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase-like transcription factor-like protein 0.0
Putative N-terminus
sp_v2.0_unigene9197 SustainPine v2.0 1323
AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9T786_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene9294 SustainPine v2.0 2119
AutoFact: Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9RN23_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene9358 SustainPine v2.0 865
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SLY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger 0.0
N-terminus
sp_v2.0_unigene9411 SustainPine v2.0 1692
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
Complete
sp_v2.0_unigene9504 SustainPine v2.0 527
AutoFact: cellulose synthase-like protein B4 [Arabidopsis thaliana] sp|O80891.1|CSLB4_ARATH RecName: Full=Cellulose synthase-like protein B4; Short=AtCslB4 gb|AAC25936.1| putative cellulose synthase [Arabidopsis thaliana] gb|AEC08698.1| cellulose synthase-like prot 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellulose synthase-like protein e1 0.0
N-terminus
sp_v2.0_unigene9514 SustainPine v2.0 1202
AutoFact: MAD domain containing protein 6.0e-05
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene9567 SustainPine v2.0 673
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUA7_RICCO 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 1 3.99746e-35
C-terminus
sp_v2.0_unigene9598 SustainPine v2.0 1110
AutoFact: Putative copine I (Fragment) n=1 Tax=Picea abies RepID=B2KZG6_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rglg2-like 0.0
N-terminus
sp_v2.0_unigene9634 SustainPine v2.0 719
AutoFact: UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RLH6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: udp-glycosyltransferase 73b4 0.0
C-terminus
sp_v2.0_unigene9683 SustainPine v2.0 2255
AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brca1-associated protein 0.0
Complete
sp_v2.0_unigene9742 SustainPine v2.0 444
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ring u-box domain-containing protein 4.11929e-28
Internal
sp_v2.0_unigene9761 SustainPine v2.0 325
AutoFact: putative zinc transporter [Solanum lycopersicum] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zip transporter 1.45875e-41
Internal
sp_v2.0_unigene9781 SustainPine v2.0 1549
AutoFact: embryo defective 1379 protein [Arabidopsis thaliana] gb|AAO73901.1| hypothetical protein [Arabidopsis thaliana] gb|AAS76229.1| At5g21140 [Arabidopsis thaliana] gb|AAS92326.1| At5g21140 [Arabidopsis thaliana] gb|AED92939.1| embryo defective 1379 protein [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: embryo defective 1379 protein 0.0
Complete
sp_v2.0_unigene9829 SustainPine v2.0 1226
AutoFact: RING-H2 subgroup RHE protein [Populus tremula x Populus alba] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl3c 0.0
Complete
sp_v2.0_unigene10002 SustainPine v2.0 2583
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFB9_RICCO 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: ring u-box domain-containing protein 8.79016e-28
Putative Complete
sp_v2.0_unigene10067 SustainPine v2.0 1565
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SKI3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: sister chromatid cohesion protein dcc1-like 0.0
Complete
sp_v2.0_unigene10073 SustainPine v2.0 751
AutoFact: zf-C3HC4 multi-domain protein 9.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rfwd3-like 4.70487e-23
Internal
sp_v2.0_unigene10103 SustainPine v2.0 657
AutoFact: DNMT1-RFD domain containing protein 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: enhanced downy mildew 2 0.0
N-terminus
sp_v2.0_unigene10168 SustainPine v2.0 1624
AutoFact: transcription initiation factor TFIIH subunit H2 [Arabidopsis thaliana] gb|AAM90909.1|AF499443_1 p44/SSL1-like protein [Arabidopsis thaliana] gb|AAC97995.1| Similar to gb|Z30094 basic transcripion factor 2, 44 kD subunit from Homo sapiens. EST gb|W43325 c 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: general transcription factor iih subunit 2-like 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain