Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene8250 SustainPine v2.0 3080
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
Complete
sp_v2.0_unigene8370 SustainPine v2.0 826
AutoFact: Putative RING zinc finger protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX96_PINPS 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin ligase-like protein 0.0
C-terminus
sp_v2.0_unigene8509 SustainPine v2.0 768
AutoFact: dehydrodolichyl diphosphate synthase 2 [Arabidopsis thaliana] sp|Q56Y11.2|DDPS2_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 2; Short=Dedol-PP synthase 2 dbj|BAA97345.1| unnamed protein product [Arabidopsis thaliana] gb|ACI31313.1| At5g58770 [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene8524 SustainPine v2.0 2657
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6K7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rnf167-like 0.0
Complete
sp_v2.0_unigene8565 SustainPine v2.0 2579
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9S201_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase synoviolin 0.0
Complete
sp_v2.0_unigene8575 SustainPine v2.0 1077
AutoFact: putative BRCT domain-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein breast cancer susceptibility 1 homolog 0.0
C-terminus
sp_v2.0_unigene8578 SustainPine v2.0 615
AutoFact: RING-H2 finger protein ATL51 [Arabidopsis thaliana] sp|Q9SRQ8.2|ATL51_ARATH RecName: Full=RING-H2 finger protein ATL51 gb|AAF03479.1|AC009327_18 unknown protein [Arabidopsis thaliana] gb|AAM62688.1| RING-H2 zinc finger protein-like [Arabidopsis thaliana] 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase os04g0590900-like 2.20657e-38
N-terminus
sp_v2.0_unigene8580 SustainPine v2.0 2259
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB36_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase sis3-like 0.0
Complete
sp_v2.0_unigene8647 SustainPine v2.0 2077
AutoFact: [R] COG0666 FOG: Ankyrin repeat 3.0e-07
FL-Next: sp=Probable E3 ubiquitin-protein ligase XBOS34; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8653 SustainPine v2.0 940
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna-binding protein chloroplast 0.0
Internal
sp_v2.0_unigene8661 SustainPine v2.0 737
AutoFact: A_TM018A10.24 gene product [Arabidopsis thaliana] emb|CAB80888.1| AT4g00790 [Arabidopsis thaliana] 8.0e-38
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: vacuolar protein sorting-associated protein 8 homolog 0.0
Internal
sp_v2.0_unigene8662 SustainPine v2.0 1259
AutoFact: Zinc finger family protein (Fragment) n=1 Tax=Picea abies RepID=Q3ZDI5_PICAB 2.0e-34
FL-Next: sp=Putative RING-H2 finger protein ATL69; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger family protein 3.20617e-42
Complete
sp_v2.0_unigene8720 SustainPine v2.0 931
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase splayed 0.0
Putative N-terminus
sp_v2.0_unigene8756 SustainPine v2.0 3811
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Putative Complete
sp_v2.0_unigene8769 SustainPine v2.0 1723
AutoFact: copine-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rglg2 0.0
Complete
sp_v2.0_unigene8865 SustainPine v2.0 722
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TTS1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 0.0
Putative N-terminus
sp_v2.0_unigene8942 SustainPine v2.0 1173
AutoFact: TED3; TED3 (REVERSAL OF THE DET PHENOTYPE 3); protein binding / zinc ion binding; K06664 peroxin-2 0.0
FL-Next: sp=Peroxisome biogenesis protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8959 SustainPine v2.0 1919
AutoFact: DUF1117 multi-domain protein 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase ring1-like 0.0
C-terminus
sp_v2.0_unigene8964 SustainPine v2.0 1400
AutoFact: receptor protein kinase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g06840-like 0.0
Putative C-terminus
sp_v2.0_unigene9050 SustainPine v2.0 924
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain