Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene6148 SustainPine v2.0 549
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S0D0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 3-like 0.0
Internal
sp_v2.0_unigene6219 SustainPine v2.0 388
AutoFact: Cell division cycle, putative n=1 Tax=Ricinus communis RepID=B9S1Y4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division cycle cofactor of apc complex 0.0
Internal
sp_v2.0_unigene6310 SustainPine v2.0 418
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.24703e-21
N-terminus
sp_v2.0_unigene6339 SustainPine v2.0 1201
AutoFact: U3-55K-like protein 2 [Arabidopsis thaliana] gb|AAY21208.1| U3-55K-like protein 2 [Arabidopsis thaliana] gb|AEE84406.1| U3-55K-like protein 2 [Arabidopsis thaliana] 1.0e-39
FL-Next: sp=Flowering time control protein FY; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene6420 SustainPine v2.0 1364
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAN13056.1| unknown protein [Arabidopsis thaliana] gb|AEE84462.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: guanine nucleotide-binding protein 0.0
Putative Complete
sp_v2.0_unigene6454 SustainPine v2.0 1135
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AED96505.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 25-like 0.0
N-terminus
sp_v2.0_unigene6461 SustainPine v2.0 1904
AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha 0.0
C-terminus
sp_v2.0_unigene6498 SustainPine v2.0 4414
AutoFact: coatomer subunit beta'-2 [Arabidopsis thaliana] sp|Q9C827.1|COB22_ARATH RecName: Full=Coatomer subunit beta'-2; AltName: Full=Beta'-coat protein 2; Short=Beta'-COP 2 gb|AAG51545.1|AC037424_10 coatomer complex subunit, putative; 33791-27676 [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene6543 SustainPine v2.0 2204
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
C-terminus
sp_v2.0_unigene6672 SustainPine v2.0 1489
AutoFact: WD-40 repeat-containing protein [Nostoc sp. PCC 7120] dbj|BAB77807.1| WD-40 repeat protein [Nostoc sp. PCC 7120] 6.0e-12
FL-Next: sp=Guanine nucleotide-binding protein subunit beta; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: wd-40 repeat protein 0.0
C-terminus
sp_v2.0_unigene6693 SustainPine v2.0 1091
AutoFact: Pyridoxal phosphate-dependent transferase domain-containing protein [Arabidopsis thaliana] gb|AAG12531.1|AC015446_12 Similar to Allinase [Arabidopsis thaliana] gb|AEE31667.1| Pyridoxal phosphate-dependent transferase domain-containing protein [Arabidopsis 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tryptophan aminotransferase-related protein 4-like 0.0
C-terminus
sp_v2.0_unigene6789 SustainPine v2.0 529
AutoFact: Unassigned protein
Coding
sp_v2.0_unigene6858 SustainPine v2.0 1049
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 0.0
FL-Next: sp=Coatomer subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha 0.0
Internal
sp_v2.0_unigene6920 SustainPine v2.0 1387
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S411_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat compass complex protein 0.0
Complete
sp_v2.0_unigene7010 SustainPine v2.0 2018
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
C-terminus
sp_v2.0_unigene7060 SustainPine v2.0 1659
AutoFact: O-fucosyltransferase-like protein [Arabidopsis thaliana] gb|AAK25969.1|AF360259_1 putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AAN71964.1| putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AEC09474.1| O-fuc 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene7354 SustainPine v2.0 1147
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase a catalytic subunit 3 0.0
C-terminus
sp_v2.0_unigene7374 SustainPine v2.0 884
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene7406 SustainPine v2.0 1525
AutoFact: peroxisomal targeting signal type 2 receptor [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxin 7 0.0
Complete
sp_v2.0_unigene7580 SustainPine v2.0 1950
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain