Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene82953 SustainPine v2.0 569
AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q17U56_SOLBU 2.0e-14
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ramosa 1 enhancer locus 2 1.35286e-13
Putative C-terminus
sp_v2.0_unigene83068 SustainPine v2.0 582
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: protein 3.89601e-23
Internal
sp_v2.0_unigene83093 SustainPine v2.0 720
AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.48664e-41
Putative Complete
sp_v2.0_unigene83102 SustainPine v2.0 309
AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q17U56_SOLBU 2.0e-17
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: topless-related protein 1-like 1.92822e-20
Internal
sp_v2.0_unigene83104 SustainPine v2.0 516
AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 5.0e-16
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 1.83579e-20
Putative C-terminus
sp_v2.0_unigene83109 SustainPine v2.0 318
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.32735e-15
Internal
sp_v2.0_unigene83111 SustainPine v2.0 466
AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 2.0e-19
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 6.52944e-19
Internal
sp_v2.0_unigene83608 SustainPine v2.0 472
AutoFact: Eukaryotic translation initiation factor 5A 4 n=1 Tax=Picea abies RepID=Q3ZDK5_PICAB 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: eukaryotic translation initiation factor 5a isoform iv 0.0
N-terminus
sp_v2.0_unigene83763 SustainPine v2.0 887
AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: eukaryotic translation initiation factor 5a 0.0
Putative Complete
sp_v2.0_unigene83772 SustainPine v2.0 403
AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 1.0e-32
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: eukaryotic translation initiation factor 5a 1.37065e-34
Putative C-terminus
sp_v2.0_unigene84080 SustainPine v2.0 997
AutoFact: Guanine nucleotide-binding protein subunit beta-like protein n=4 Tax=rosids RepID=GBLP_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: guanine nucleotide-binding protein subunit beta-like protein 0.0
Complete
sp_v2.0_unigene85029 SustainPine v2.0 595
AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat family protein 0.0
Internal
sp_v2.0_unigene85169 SustainPine v2.0 440
AutoFact: WD-repeat protein, putative 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.45865e-09
N-terminus
sp_v2.0_unigene85399 SustainPine v2.0 854
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 6.76405e-17
C-terminus
sp_v2.0_unigene85717 SustainPine v2.0 613
AutoFact: RecName: Full=50S ribosomal protein L27, chloroplastic; AltName: Full=CL27; Flags: Precursor gb|AAA34104.1| ribosomal protein L27 [Nicotiana tabacum] gb|AAA34115.1| ribosomal protein L27 [Nicotiana tabacum] 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l27 0.0
Putative Complete
sp_v2.0_unigene85817 SustainPine v2.0 286
AutoFact: Topless-related protein 1 [Arabidopsis thaliana] sp|Q0WV90.3|TPR1_ARATH RecName: Full=Topless-related protein 1; AltName: Full=Protein MODIFIER OF SNC1 10 gb|AEE36412.1| Topless-related protein 1 [Arabidopsis thaliana] 2.0e-13
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 4.73025e-15
Internal
sp_v2.0_unigene85832 SustainPine v2.0 1028
AutoFact: embryo sac development arrest 7 protein [Arabidopsis thaliana] emb|CAB72169.1| putative protein [Arabidopsis thaliana] gb|AAL47467.1| AT3g56990/F24I3_70 [Arabidopsis thaliana] gb|AEE79596.1| embryo sac development arrest 7 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleolar protein 10 0.0
Internal
sp_v2.0_unigene85849 SustainPine v2.0 474
AutoFact: WD domain, G-beta repeat containing protein [Oryza sativa Japonica Group] 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene85853 SustainPine v2.0 1004
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene85855 SustainPine v2.0 352
AutoFact: WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana] emb|CAB96849.1| putative protein [Arabidopsis thaliana] gb|AED91612.1| WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana] 7.0e-11
FL-Next: tr=Putative uncharacterized protein T30N20_210; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd and tetratricopeptide repeats protein 1 2.93298e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain