Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene80035 SustainPine v2.0 565
AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene80438 SustainPine v2.0 974
AutoFact: Pre-mRNA-processing factor 19 [Arabidopsis thaliana] sp|Q94BR4.1|PR19A_ARATH RecName: Full=Pre-mRNA-processing factor 19 homolog 1; AltName: Full=MOS4-associated complex protein 3A; Short=MAC protein 3A; AltName: Full=Plant U-box protein 59; AltName: Full 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein pub59 0.0
N-terminus
sp_v2.0_unigene80586 SustainPine v2.0 609
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 6.0e-30
FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: eukaryotic translation initiation factor 5a1 9.87628e-33
Complete
sp_v2.0_unigene80598 SustainPine v2.0 651
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5a 0.0
Putative Complete
sp_v2.0_unigene80773 SustainPine v2.0 210
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5a1 1.45004e-20
Putative C-terminus
sp_v2.0_unigene80840 SustainPine v2.0 493
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 8.0e-24
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 9.61252e-27
Putative C-terminus
sp_v2.0_unigene80963 SustainPine v2.0 373
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene80971 SustainPine v2.0 558
AutoFact: Eukaryotic translation initiation factor 5A-1 n=47 Tax=Magnoliophyta RepID=IF5A1_MEDSA 7.00649e-45
FL-Next: sp=Eukaryotic translation initiation factor 5A-1; Medicago sativa (Alfalfa). 0.0
Blast2go: eukaryotic translation initiation factor 5a1 4.2039e-45
Complete
sp_v2.0_unigene81206 SustainPine v2.0 755
AutoFact: coatomer subunit beta'-2 [Arabidopsis thaliana] sp|Q9C827.1|COB22_ARATH RecName: Full=Coatomer subunit beta'-2; AltName: Full=Beta'-coat protein 2; Short=Beta'-COP 2 gb|AAG51545.1|AC037424_10 coatomer complex subunit, putative; 33791-27676 [Arabidopsis th 0.0
FL-Next: sp=Coatomer subunit beta'-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer subunit beta -2-like 0.0
Putative C-terminus
sp_v2.0_unigene81329 SustainPine v2.0 817
AutoFact: RecName: Full=Coatomer subunit beta'-2; AltName: Full=Beta'-coat protein 2; Short=Beta'-COP 2 dbj|BAD25014.1| putative coatomer protein complex, subunit beta 2 (beta prime) [Oryza sativa Japonica Group] 2.0e-24
FL-Next: sp=Coatomer subunit beta'-2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: coatomer subunit beta -2-like 6.06484e-31
Putative C-terminus
sp_v2.0_unigene81481 SustainPine v2.0 1258
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Blast2go: calreticulin precursor 0.0
N-terminus
sp_v2.0_unigene81547 SustainPine v2.0 249
AutoFact: Eukaryotic initiation factor 4A-like protein n=2 Tax=Chlamydomonadales RepID=A8IP17_CHLRE 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translational initiation factor 4a-1 2.69929e-25
C-terminus
sp_v2.0_unigene81730 SustainPine v2.0 524
AutoFact: RecName: Full=Guanine nucleotide-binding protein subunit beta-like protein emb|CAA69934.1| G protein beta subunit-like [Medicago sativa subsp. x varia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: guanine nucleotide-binding protein subunit beta-like protein 0.0
N-terminus
sp_v2.0_unigene81817 SustainPine v2.0 867
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene81903 SustainPine v2.0 647
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: predicted protein [Populus trichocarpa] 5.97605e-07
C-terminus
sp_v2.0_unigene82033 SustainPine v2.0 1070
AutoFact: WD-repeat protein, putative 6.0e-34
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 2.75329e-40
Internal
sp_v2.0_unigene82107 SustainPine v2.0 436
AutoFact: Monodehydroascorbate reductase n=1 Tax=Rheum australe RepID=Q0GA76_RHEAU 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: monodehydroascorbate reductase 1.39351e-31
Internal
sp_v2.0_unigene82148 SustainPine v2.0 431
AutoFact: Charged multivesicular body protein 4b, putative n=4 Tax=rosids RepID=B9RKD5_RICCO 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar protein sorting-associated protein 32-2 0.0
Internal
sp_v2.0_unigene82182 SustainPine v2.0 1320
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 1.0e-27
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: topless-related protein 4-like 2.80669e-29
Internal
sp_v2.0_unigene82272 SustainPine v2.0 633
AutoFact: eukaryotic initiation factor 4A [Pennisetum glaucum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic initiation factor 4a 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain