Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene70471 SustainPine v2.0 204
AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74) 2.0e-14
FL-Next: sp=Protein SPA1-RELATED 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein spa1-related 2-like 1.20491e-18
Internal
sp_v2.0_unigene71152 SustainPine v2.0 344
AutoFact: RecName: Full=Coatomer subunit alpha-2; AltName: Full=Alpha-coat protein 2; Short=Alpha-COP 2 gb|AAK18837.1|AC082645_7 putative alpha-coat protein [Oryza sativa Japonica Group] gb|ABF98514.1| Coatomer alpha subunit, putative, expressed [Oryza sativa Japon 9.99995e-41
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 3.54529e-43
Internal
sp_v2.0_unigene71532 SustainPine v2.0 248
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RPC6_RICCO 1.0e-13
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: leunig 3.25626e-16
Putative C-terminus
sp_v2.0_unigene71534 SustainPine v2.0 293
AutoFact: sae68g11.y1 Gm-c1064 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1064-3406 5' similar to TR:Q9ZQD2 Q9ZQD2 T2N18.8 PROTEIN. ;, mRNA sequence. 4.0e-12
FL-Next: tr=Os12g0172500 protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v2.0_unigene71819 SustainPine v2.0 331
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40-repeat protein 4.06377e-44
Internal
sp_v2.0_unigene72400 SustainPine v2.0 363
AutoFact: protein HIRA [Zea mays] sp|Q32SG6.1|HIRA_MAIZE RecName: Full=Protein HIRA; AltName: Full=Histone regulator protein gb|AAY24681.1| HIRA [Zea mays] 4.0e-10
FL-Next: sp=Protein HIRA; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein hira 8.02265e-14
C-terminus
sp_v2.0_unigene73170 SustainPine v2.0 393
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: topless-related protein 4 9.8361e-21
Internal
sp_v2.0_unigene73480 SustainPine v2.0 381
AutoFact: protein pleiotropic regulatory locus 1 [Arabidopsis thaliana] sp|Q42384.1|PRL1_ARATH RecName: Full=Protein pleiotropic regulatory locus 1; Short=Protein PRL1; AltName: Full=MOS4-associated complex protein 2; Short=MAC protein 2 emb|CAA58031.1| PRL1 [Arabi 3.0e-13
FL-Next: sp=Protein pleiotropic regulatory locus 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: prl1 protein 2.43804e-16
Internal
sp_v2.0_unigene73572 SustainPine v2.0 447
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.46186e-12
N-terminus
sp_v2.0_unigene73813 SustainPine v2.0 312
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 2.0e-17
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 4.2635e-17
Internal
sp_v2.0_unigene73862 SustainPine v2.0 419
AutoFact: WD-40 repeat protein family 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat protein 3.10317e-30
Putative N-terminus
sp_v2.0_unigene74454 SustainPine v2.0 383
AutoFact: PsaD multi-domain protein 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100256388 7.49002e-21
C-terminus
sp_v2.0_unigene74601 SustainPine v2.0 318
AutoFact: Cellulose synthase catalytic subunit n=2 Tax=Pinus RepID=Q5DI93_PINTA 4.0e-29
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase a 2.03343e-33
Internal
sp_v2.0_unigene75905 SustainPine v2.0 328
AutoFact: glycine-rich protein 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 1.00145e-24
Internal
sp_v2.0_unigene76471 SustainPine v2.0 271
AutoFact: Unassigned protein
FL-Next: tr=Breast carcinoma amplified sequence 3-like protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: breast carcinoma amplified sequence 3-like protein 3.94994e-14
C-terminus
sp_v2.0_unigene76550 SustainPine v2.0 470
AutoFact: pfam12896, Apc4, Anaphase-promoting complex, cyclosome, subunit 4 4.0e-08
FL-Next: sp=Anaphase-promoting complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: anaphase-promoting complex subunit 4 2.20414e-16
Internal
sp_v2.0_unigene76798 SustainPine v2.0 656
AutoFact: vacuolar protein sorting-associated protein 32-2 [Arabidopsis thaliana] ref|NP_001078468.1| vacuolar protein sorting-associated protein 32-2 [Arabidopsis thaliana] sp|Q9SZE4.1|VP322_ARATH RecName: Full=Vacuolar protein sorting-associated protein 32 homolo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar protein sorting-associated protein 32-2 0.0
N-terminus
sp_v2.0_unigene76800 SustainPine v2.0 909
AutoFact: Putative vernalization independence (Fragment) n=5 Tax=Picea abies RepID=Q1EJS0_PICAB 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vernalization independence 4.16076e-26
C-terminus
sp_v2.0_unigene76869 SustainPine v2.0 548
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase catalytic subunit 0.0
Internal
sp_v2.0_unigene76994 SustainPine v2.0 781
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S2C2_PHYPA 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein phosphatase bsl3 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain