Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene62822 SustainPine v2.0 694
AutoFact: elongator protein 2 [Arabidopsis thaliana] gb|AEE32440.1| elongator protein 2 [Arabidopsis thaliana] 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: elongator protein 2 8.84651e-29
N-terminus
sp_v2.0_unigene62966 SustainPine v2.0 405
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ddb1- and cul4-associated factor 2.49015e-17
N-terminus
sp_v2.0_unigene63011 SustainPine v2.0 413
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RAI4_RICCO 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd repeat-containing protein 1.03411e-12
Putative N-terminus
sp_v2.0_unigene63027 SustainPine v2.0 516
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 1.0e-15
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ramosa 1 enhancer locus 2 1.77751e-15
Internal
sp_v2.0_unigene63058 SustainPine v2.0 816
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene63066 SustainPine v2.0 383
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: topless-related protein 4 5.80047e-12
Internal
sp_v2.0_unigene63118 SustainPine v2.0 382
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
N-terminus
sp_v2.0_unigene63140 SustainPine v2.0 351
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene63307 SustainPine v2.0 501
AutoFact: putative DEAD/DEAH box helicase [Narcissus pseudonarcissus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic initiation factor 4a-10-like 0.0
N-terminus
sp_v2.0_unigene63633 SustainPine v2.0 1003
AutoFact: Metallothio multi-domain protein 5.0e-09
FL-Next: tr=Arabinogalactan-like protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: transducin wd40 domain-containing protein 7.88338e-25
Putative Complete
sp_v2.0_unigene63752 SustainPine v2.0 487
AutoFact: Coatomer alpha subunit-like protein n=2 Tax=Lotus japonicus RepID=Q70I39_LOTJA 4.0e-20
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer subunit alpha-1-like 1.4863e-24
Internal
sp_v2.0_unigene63778 SustainPine v2.0 683
AutoFact: cinnamoyl-CoA reductase-like protein [Arabidopsis thaliana] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cinnamoyl- reductase-like protein 2.158e-43
Putative C-terminus
sp_v2.0_unigene63784 SustainPine v2.0 571
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene63791 SustainPine v2.0 335
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat family protein 2.60399e-21
C-terminus
sp_v2.0_unigene63849 SustainPine v2.0 531
AutoFact: WD40 repeat-containing protein SMU1 [Arabidopsis thaliana] gb|AAL58892.1|AF462796_1 At1g73720/F25P22_14 [Arabidopsis thaliana] gb|AAM26696.1| At1g73720/F25P22_14 [Arabidopsis thaliana] gb|AEE35501.1| WD40 repeat-containing protein SMU1 [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
Putative N-terminus
sp_v2.0_unigene63872 SustainPine v2.0 676
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 3.66149e-31
C-terminus
sp_v2.0_unigene63985 SustainPine v2.0 416
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
Internal
sp_v2.0_unigene64007 SustainPine v2.0 807
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RJH4_RICCO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene64106 SustainPine v2.0 565
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 1.62971e-42
Internal
sp_v2.0_unigene64167 SustainPine v2.0 560
AutoFact: Neurobeachin, putative n=1 Tax=Ricinus communis RepID=B9RZY6_RICCO 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable inactive serine threonine-protein kinase lvsg-like 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain