Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1891 SustainPine v2.0 1403
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAC41980.1| unknown protein [Arabidopsis thaliana] gb|AAO64896.1| At4g34280 [Arabidopsis thaliana] gb|AEE86354.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene2010 SustainPine v2.0 1738
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene2023 SustainPine v2.0 1640
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: glycine-rich protein 0.0
C-terminus
sp_v2.0_unigene2101 SustainPine v2.0 2071
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S4H8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atg18c-like protein 0.0
Complete
sp_v2.0_unigene2106 SustainPine v2.0 2446
AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK32933.1|AF367346_1 At2g20330/F11A3.12 [Arabidopsis thaliana] gb|AAL16252.1|AF428322_1 At2g20330/F11A3.12 [Arabidopsis thaliana] gb|AAD21755.1| putative WD-40 repeat protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 70-like 0.0
Complete
sp_v2.0_unigene2114 SustainPine v2.0 2117
AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus] 0.0
FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene2139 SustainPine v2.0 2079
AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAU94425.1| At1g65030 [Arabidopsis thaliana] gb|AEE34317.1| WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p21-activated protein kinase-interacting protein 1-like 0.0
Complete
sp_v2.0_unigene2318 SustainPine v2.0 2045
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene2357 SustainPine v2.0 1917
AutoFact: Pre-mRNA splicing factor n=1 Tax=Cucumis melo subsp. melo RepID=E5GBJ7_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-processing factor 17-like 0.0
Complete
sp_v2.0_unigene2410 SustainPine v2.0 4881
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene2441 SustainPine v2.0 2532
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
N-terminus
sp_v2.0_unigene2478 SustainPine v2.0 1442
AutoFact: WD-40 repeat protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
Putative Complete
sp_v2.0_unigene2517 SustainPine v2.0 1345
AutoFact: O-fucosyltransferase-like protein [Arabidopsis thaliana] gb|AAK92823.1| putative auxin-independent growth promoter protein [Arabidopsis thaliana] gb|AAN41394.1| putative auxin-independent growth promoter protein [Arabidopsis thaliana] gb|AEE35817.1| O-fuc 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: o-fucosyltransferase-like protein 0.0
C-terminus
sp_v2.0_unigene2518 SustainPine v2.0 2001
AutoFact: Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] gb|EAQ39883.1| Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phosphoenolpyruvate carboxykinase 0.0
Complete
sp_v2.0_unigene2618 SustainPine v2.0 1013
AutoFact: kinesin-like protein KIF18A [Danio rerio] gb|AAH47799.1| Zgc:55995 [Danio rerio] gb|AAI63966.1| Zgc:55995 protein [Danio rerio] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromosome-associated kinesin 0.0
N-terminus
sp_v2.0_unigene2672 SustainPine v2.0 1592
AutoFact: THO complex subunit 6 [Arabidopsis thaliana] sp|Q8L4M1.1|DWA1_ARATH RecName: Full=WD repeat-containing protein DWA1; AltName: Full=Protein DWD HYPERSENSITIVE TO ABA 1 gb|AAM20569.1| putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAM91279.1| putat 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat protein 0.0
Putative Complete
sp_v2.0_unigene2748 SustainPine v2.0 1501
AutoFact: phosphorylase family protein [Arabidopsis thaliana] gb|AAK44093.1|AF370278_1 unknown protein [Arabidopsis thaliana] gb|AAN13118.1| unknown protein [Arabidopsis thaliana] gb|AEE84892.1| phosphorylase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bark storage protein a-like 0.0
Putative Complete
sp_v2.0_unigene2896 SustainPine v2.0 869
AutoFact: pfam12490, BCAS3, Breast carcinoma amplified sequence 3 8.0e-35
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene2913 SustainPine v2.0 2362
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|ACI46510.1| At5g11240 [Arabidopsis thaliana] gb|AED91651.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
Putative Complete
sp_v2.0_unigene2941 SustainPine v2.0 834
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.92502e-31
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain