Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1021 SustainPine v2.0 2313
AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRI2_RICCO 0.0
FL-Next: sp=Dynamin-like protein ARC5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gtp binding 0.0
C-terminus
sp_v2.0_unigene1196 SustainPine v2.0 2888
AutoFact: Zinc finger CCCH domain-containing protein 17 n=4 Tax=Oryza sativa RepID=C3H17_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 48 0.0
Complete
sp_v2.0_unigene1274 SustainPine v2.0 1938
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box and wd40 domain 0.0
Putative Complete
sp_v2.0_unigene1275 SustainPine v2.0 2573
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: family 2 glycosyltransferase 0.0
N-terminus
sp_v2.0_unigene1384 SustainPine v2.0 1589
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SAP3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene1388 SustainPine v2.0 1451
AutoFact: WD repeat-containing protein 5 [Danio rerio] gb|AAH52124.1| Wdr5 protein [Danio rerio] gb|AAH66729.1| Wdr5 protein [Danio rerio] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat compass complex protein 0.0
Complete
sp_v2.0_unigene1390 SustainPine v2.0 1352
AutoFact: [R] COG2319 FOG: WD40 repeat 0.0
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: autophagy-related protein 18-like 0.0
Complete
sp_v2.0_unigene1429 SustainPine v2.0 1728
AutoFact: WD-repeat cell cycle regulatory protein [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene1447 SustainPine v2.0 1599
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin beta-like protein 3-like 0.0
C-terminus
sp_v2.0_unigene1451 SustainPine v2.0 2175
AutoFact: pfam12490, BCAS3, Breast carcinoma amplified sequence 3 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 2.43218e-16
C-terminus
sp_v2.0_unigene1500 SustainPine v2.0 2236
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene1544 SustainPine v2.0 2434
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AEE82568.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
C-terminus
sp_v2.0_unigene1553 SustainPine v2.0 1526
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AEC06823.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd repeat-containing protein 75-like 0.0
Putative Complete
sp_v2.0_unigene1559 SustainPine v2.0 2865
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
Putative Complete
sp_v2.0_unigene1662 SustainPine v2.0 1739
AutoFact: O-fucosyltransferase-like protein [Arabidopsis thaliana] gb|AAK25969.1|AF360259_1 putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AAN71964.1| putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AEC09474.1| O-fuc 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
C-terminus
sp_v2.0_unigene1683 SustainPine v2.0 797
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AEC06823.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transducin family protein 0.0
Internal
sp_v2.0_unigene1721 SustainPine v2.0 2189
AutoFact: breast carcinoma amplified sequence 3-like protein [Oryza sativa Japonica Group] 2.0e-22
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene1738 SustainPine v2.0 2092
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDD1_RICCO 0.0
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene1753 SustainPine v2.0 1003
AutoFact: Type II inositol-1,4,5-trisphosphate 5-phosphatase FRA3 [Arabidopsis thaliana] sp|Q84W55.2|IP5P4_ARATH RecName: Full=Type II inositol-1,4,5-trisphosphate 5-phosphatase FRA3; AltName: Full=Protein FRAGILE FIBER 3 gb|AAV87313.1| type II inositol polyphospha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endonuclease exonuclease phosphatase family protein 0.0
Putative C-terminus
sp_v2.0_unigene1792 SustainPine v2.0 2770
AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulatory-associated protein of tor 1-like 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain