Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene14738 SustainPine v2.0 1917
AutoFact: Periodic tryptophan protein-associated region; WD40-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: periodic tryptophan protein 2 0.0
C-terminus
sp_v2.0_unigene14805 SustainPine v2.0 1271
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAK62612.1| AT5g35570/K2K18_1 [Arabidopsis thaliana] gb|AAM47340.1| AT5g35570/K2K18_1 [Arabidopsis thaliana] gb|AED93982.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene14829 SustainPine v2.0 824
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAB51411.1| putative protein [Arabidopsis thaliana] emb|CAB81228.1| putative protein [Arabidopsis thaliana] gb|AEE82991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin family protein 1.29124e-37
C-terminus
sp_v2.0_unigene14882 SustainPine v2.0 1160
AutoFact: putative cyclophilin (70.8 kD) (cyp-15) [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidylprolyl isomerase domain and wd repeat-containing protein 1 0.0
Complete
sp_v2.0_unigene15077 SustainPine v2.0 1635
AutoFact: Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: topless-related protein 3-like 0.0
Putative Complete
sp_v2.0_unigene15080 SustainPine v2.0 1229
AutoFact: kinesin like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable 125 kDa kinesin-related protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: kinesin-like protein 0.0
N-terminus
sp_v2.0_unigene15085 SustainPine v2.0 1657
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase-like protein 0.0
C-terminus
sp_v2.0_unigene15186 SustainPine v2.0 688
AutoFact: WD40 repeat-containing protein [Dictyostelium discoideum AX4] sp|Q55FJ2.1|WDR91_DICDI RecName: Full=WD repeat-containing protein 91 homolog gb|EAL73495.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4] 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene15295 SustainPine v2.0 1123
AutoFact: WD-repeat protein, putative 3.0e-10
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.45343e-13
Putative C-terminus
sp_v2.0_unigene15307 SustainPine v2.0 1690
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis RepID=B9S7C0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene15369 SustainPine v2.0 2151
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] ref|NP_175682.2| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAD55591.1|AC008016_1 Similar to gb|AJ010025 unr-interacting protein from Homo sapiens and contains 3 P 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-threonine kinase receptor-associated 0.0
Complete
sp_v2.0_unigene15561 SustainPine v2.0 1614
AutoFact: Charged multivesicular body protein 4b, putative n=4 Tax=rosids RepID=B9RKD5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene15570 SustainPine v2.0 1906
AutoFact: FVE n=2 Tax=Papilionoideae RepID=Q52ZH8_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Complete
sp_v2.0_unigene16524 SustainPine v2.0 1566
AutoFact: cell cycle arrest protein BUB3 [Arabidopsis thaliana] dbj|BAB02543.1| mitotic checkpoint protein [Arabidopsis thaliana] gb|AAM64953.1| mitotic checkpoint protein, putative [Arabidopsis thaliana] gb|AAO42274.1| putative mitotic checkpoint protein [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic checkpoint protein 0.0
Complete
sp_v2.0_unigene16626 SustainPine v2.0 2156
AutoFact: transducin-like protein [Arabidopsis thaliana] gb|AAK43883.1|AF370506_1 putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAD10153.1| putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAM91214.1| putative WD-40 repeat protein [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamate-rich wd repeat-containing protein 1 0.0
Complete
sp_v2.0_unigene16872 SustainPine v2.0 1683
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana] gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana] gb|AED92689.1| RNA recognition motif-containing 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene16937 SustainPine v2.0 1610
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
Complete
sp_v2.0_unigene17015 SustainPine v2.0 1971
AutoFact: Flap endonuclease 1 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=FEN1_OSTLU 0.0
FL-Next: sp=Flap endonuclease 1; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: flap endonuclease-1 0.0
Complete
sp_v2.0_unigene17271 SustainPine v2.0 1280
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene17531 SustainPine v2.0 2398
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain