Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene13074 SustainPine v2.0 807
AutoFact: Beige/BEACH and WD40 domain-containing protein n=2 Tax=Arabidopsis thaliana RepID=F4JHT3_ARATH 0.0
FL-Next: tr=Beige/BEACH and WD40 domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene13105 SustainPine v2.0 1749
AutoFact: peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] gb|AAM13295.1| peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase-like 2-like 0.0
Complete
sp_v2.0_unigene13112 SustainPine v2.0 721
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAB51411.1| putative protein [Arabidopsis thaliana] emb|CAB81228.1| putative protein [Arabidopsis thaliana] gb|AEE82991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 1.10141e-27
Internal
sp_v2.0_unigene13165 SustainPine v2.0 1913
AutoFact: pfam00400, WD40, WD domain, G-beta repeat 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Putative Complete
sp_v2.0_unigene13346 SustainPine v2.0 640
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AED90947.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene13544 SustainPine v2.0 2763
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing 0.0
C-terminus
sp_v2.0_unigene13627 SustainPine v2.0 1977
AutoFact: Guanine nucleotide-binding protein subunit beta-1 n=9 Tax=core eudicotyledons RepID=GBB1_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: g protein beta subunit 0.0
Complete
sp_v2.0_unigene13687 SustainPine v2.0 675
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAF97963.1|AC000103_13 F21J9.19 [Arabidopsis thaliana] gb|AAK76647.1| unknown protein [Arabidopsis thaliana] gb|AAL85055.1| unknown protein [Arabidopsis thaliana] gb|AEE30544.1| transduc 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box and wd40 domain 0.0
Putative C-terminus
sp_v2.0_unigene13833 SustainPine v2.0 415
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 2.21157e-17
Internal
sp_v2.0_unigene13861 SustainPine v2.0 1628
AutoFact: putative tRNA 2'phosphotransferase [Arabidopsis thaliana] gb|AEC10539.1| putative tRNA 2'phosphotransferase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna 2 phosphotransferase 0.0
Putative Complete
sp_v2.0_unigene13875 SustainPine v2.0 3504
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] ref|NP_850516.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL07141.1| unknown protein [Arabidopsis thaliana] gb|AAM83246.1| AT3g05090/T12H1_5 [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 48-like 0.0
Complete
sp_v2.0_unigene13901 SustainPine v2.0 507
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin wd-40 repeat-containing protein 2.41111e-17
N-terminus
sp_v2.0_unigene14257 SustainPine v2.0 247
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.86871e-24
Putative N-terminus
sp_v2.0_unigene14268 SustainPine v2.0 351
AutoFact: 60S ribosomal protein L21 n=2 Tax=Postia placenta Mad-698-R RepID=B8P5U9_POSPM 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l21 0.0
N-terminus
sp_v2.0_unigene14332 SustainPine v2.0 951
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] emb|CAB70984.1| putative protein [Arabidopsis thaliana] gb|AEE79188.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.13068e-38
Putative N-terminus
sp_v2.0_unigene14378 SustainPine v2.0 394
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9RE28_RICCO 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: stomatal cytokinesis defective scd1 protein 5.60519e-45
Internal
sp_v2.0_unigene14518 SustainPine v2.0 520
AutoFact: PPR domain containing protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.73783e-41
Internal
sp_v2.0_unigene14584 SustainPine v2.0 2094
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicopy suppressor of ira1 0.0
Complete
sp_v2.0_unigene14633 SustainPine v2.0 984
AutoFact: putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica Group] dbj|BAD10521.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica Group] gb|EAY84395.1| hypothetical protein OsI_05771 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene14717 SustainPine v2.0 1368
AutoFact: Bromodomain domain containing protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: bromodomain and wd repeat-containing protein 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain