Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Leucine-rich repeat 3

Term: IPR011713  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene44467 SustainPine v2.0 587
AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 6.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene44695 SustainPine v2.0 322
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tir-nbs-lrr class disease resistance protein 9.88682e-34
Putative Complete
sp_v2.0_unigene44726 SustainPine v2.0 499
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 8.61108e-37
Internal
sp_v2.0_unigene45597 SustainPine v2.0 679
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 1.47575e-36
Internal
sp_v2.0_unigene48040 SustainPine v2.0 421
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 4.2039e-45
Internal
sp_v2.0_unigene49380 SustainPine v2.0 434
AutoFact: White-brown-complex ABC transporter family n=2 Tax=Populus trichocarpa RepID=B9IIG9_POPTR 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter g family member 22 1.19941e-36
Internal
sp_v2.0_unigene49563 SustainPine v2.0 528
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIV9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal
sp_v2.0_unigene50184 SustainPine v2.0 213
AutoFact: WRKY35 transcription factor n=1 Tax=Brassica napus RepID=C4N1L4_BRANA 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 3.28605e-25
Putative C-terminus
sp_v2.0_unigene50865 SustainPine v2.0 221
AutoFact: Putative disease resistance protein n=1 Tax=Arabidopsis thaliana RepID=Q9M8X8_ARATH 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tir-nbs-lrr class disease resistance protein 1.18155e-22
Putative N-terminus
sp_v2.0_unigene52367 SustainPine v2.0 399
AutoFact: Ran GTPase binding protein, putative n=3 Tax=rosids RepID=B9SM24_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran gtpase binding 0.0
Putative C-terminus
sp_v2.0_unigene54814 SustainPine v2.0 338
AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 1.0e-29
FL-Next: sp=Probable disease resistance protein At5g66910; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tir-nbs-lrr class disease resistance protein 1.75533e-37
Putative C-terminus
sp_v2.0_unigene54915 SustainPine v2.0 228
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ46_CYCRE 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 3.67401e-30
Internal
sp_v2.0_unigene55902 SustainPine v2.0 539
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
sp_v2.0_unigene56280 SustainPine v2.0 246
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-28
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 1.43514e-35
Internal
sp_v2.0_unigene56919 SustainPine v2.0 446
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 4.42849e-39
Internal
sp_v2.0_unigene57157 SustainPine v2.0 354
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.54199e-38
Internal
sp_v2.0_unigene57279 SustainPine v2.0 191
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q75IK3_ORYSJ 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 9.73616e-22
Internal
sp_v2.0_unigene57933 SustainPine v2.0 414
AutoFact: NBS-LRR disease resistance protein homologue n=2 Tax=Hordeum vulgare RepID=Q84KC6_HORVU 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tir-nbs-lrr class disease resistance protein 1.51214e-34
Putative N-terminus
sp_v2.0_unigene59352 SustainPine v2.0 353
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 14 7.94654e-40
Putative C-terminus
sp_v2.0_unigene59389 SustainPine v2.0 1254
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RGW5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: white-brown-complex abc transporter family 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain