Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Leucine-rich repeat 3

Term: IPR011713  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene33519 SustainPine v2.0 1199
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nbs lrr 0.0
N-terminus
sp_v2.0_unigene34095 SustainPine v2.0 341
AutoFact: Low molecular weight protein-tyrosine-phosphatase, putative n=1 Tax=Ricinus communis RepID=B9SSV5_RICCO 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low molecular weight protein-tyrosine-phosphatase slr0328 3.84942e-39
C-terminus
sp_v2.0_unigene34219 SustainPine v2.0 526
AutoFact: NBS (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I9_PINTA 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nbs lrr 0.0
C-terminus
sp_v2.0_unigene34343 SustainPine v2.0 666
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Blast2go: laccase 110c 0.0
N-terminus
sp_v2.0_unigene34712 SustainPine v2.0 836
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
sp_v2.0_unigene36042 SustainPine v2.0 681
AutoFact: Herpes_gp2 multi-domain protein 1.0e-13
Blast2go: PREDICTED: hypothetical protein [Rattus norvegicus] 2.02206e-09
Coding
sp_v2.0_unigene36346 SustainPine v2.0 1130
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SKK6_RICCO 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable wrky transcription factor 12-like 4.36942e-17
Putative N-terminus
sp_v2.0_unigene36562 SustainPine v2.0 509
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 9.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.31558e-36
C-terminus
sp_v2.0_unigene37110 SustainPine v2.0 568
AutoFact: ATP-binding cassette transporter, subfamily G, member 14, group WBC protein PpABCG14 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SSA0_PHYPA 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: white-brown-complex abc transporter family 2.2715e-42
Internal
sp_v2.0_unigene38402 SustainPine v2.0 438
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.92871e-43
Putative Complete
sp_v2.0_unigene39894 SustainPine v2.0 406
AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.03459e-41
Putative Complete
sp_v2.0_unigene40002 SustainPine v2.0 226
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.70722e-22
N-terminus
sp_v2.0_unigene40394 SustainPine v2.0 472
AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.67243e-28
Internal
sp_v2.0_unigene40395 SustainPine v2.0 498
AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tir-nbs-lrr class disease resistance protein 1.04767e-33
Internal
sp_v2.0_unigene40617 SustainPine v2.0 481
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.71974e-25
Internal
sp_v2.0_unigene41200 SustainPine v2.0 499
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 9.80909e-45
Internal
sp_v2.0_unigene42355 SustainPine v2.0 604
AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene42414 SustainPine v2.0 560
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.18061e-35
Putative C-terminus
sp_v2.0_unigene42663 SustainPine v2.0 589
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tir-nbs-lrr class disease resistance protein 1.88634e-33
Putative N-terminus
sp_v2.0_unigene43463 SustainPine v2.0 589
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain