Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Leucine-rich repeat 3

Term: IPR011713  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene28754 SustainPine v2.0 1033
AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene29530 SustainPine v2.0 634
AutoFact: Tir-nbs-lrr resistance protein n=1 Tax=Populus trichocarpa RepID=B9MZW4_POPTR 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.98778e-28
C-terminus
sp_v2.0_unigene29763 SustainPine v2.0 1111
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
sp_v2.0_unigene29859 SustainPine v2.0 570
AutoFact: Ran GTPase binding protein, putative n=3 Tax=rosids RepID=B9SM24_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran gtpase binding 0.0
Putative C-terminus
sp_v2.0_unigene30307 SustainPine v2.0 575
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia ltr rider 0.0
Internal
sp_v2.0_unigene30794 SustainPine v2.0 624
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI1_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene30994 SustainPine v2.0 696
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Blast2go: laccase 90c 0.0
N-terminus
sp_v2.0_unigene31467 SustainPine v2.0 330
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: laccase 90c 0.0
Internal
sp_v2.0_unigene31904 SustainPine v2.0 238
AutoFact: NBS [Pinus taeda] 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.29829e-25
Internal
sp_v2.0_unigene31937 SustainPine v2.0 862
AutoFact: copia-type reverse transcriptase-like protein [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.58732e-43
C-terminus
sp_v2.0_unigene31942 SustainPine v2.0 342
AutoFact: TIR-NBS-LRR class disease resistance protein n=4 Tax=Arabidopsis thaliana RepID=F4I270_ARATH 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.05204e-36
C-terminus
sp_v2.0_unigene31998 SustainPine v2.0 691
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Internal
sp_v2.0_unigene32122 SustainPine v2.0 998
AutoFact: NBS (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I9_PINTA 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene32175 SustainPine v2.0 413
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical retrotransposon 0.0
Internal
sp_v2.0_unigene32839 SustainPine v2.0 585
AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitogen-activated protein kinase kinase kinase 1-like 6.14505e-35
Internal
sp_v2.0_unigene32960 SustainPine v2.0 775
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Putative N-terminus
sp_v2.0_unigene32963 SustainPine v2.0 524
AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 1.56664e-37
Putative C-terminus
sp_v2.0_unigene32987 SustainPine v2.0 327
AutoFact: NBS-LRR disease resistance protein homologue n=2 Tax=Hordeum vulgare RepID=Q84KC6_HORVU 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.93874e-23
Putative C-terminus
sp_v2.0_unigene33164 SustainPine v2.0 1197
AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene33386 SustainPine v2.0 1284
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nbs lrr 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain