Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Chlorophyll A-B binding protein, plant

Term: IPR001344  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene78935 SustainPine v2.0 719
AutoFact: Photosystem II 22 kDa protein, chloroplastic n=7 Tax=Solanaceae RepID=PSBS_SOLLC 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast chlorophyll a b-binding protein 0.0
N-terminus
sp_v2.0_unigene78983 SustainPine v2.0 463
AutoFact: Putative early light-induced protein (Fragment) n=1 Tax=Cupressus sempervirens RepID=B6V6N2_9CONI 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: early light-inducible protein 0.0
C-terminus
sp_v2.0_unigene79162 SustainPine v2.0 235
AutoFact: RecName: Full=Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor dbj|BAC83073.1| putative succinyl-CoA ligase alpha subunit [Oryza sativa Japonica 5.0e-17
FL-Next: sp=Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: succinyl- ligase 9.14387e-21
C-terminus
sp_v2.0_unigene79504 SustainPine v2.0 777
AutoFact: DNAJ heat shock protein-like protein [Arabidopsis thaliana] gb|AAD25656.1| putative heat shock protein [Arabidopsis thaliana] gb|AAL09794.1| At2g20560/T13C7.15 [Arabidopsis thaliana] gb|AAM63509.1| putative heat shock protein [Arabidopsis thaliana] gb|AAM 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene80838 SustainPine v2.0 559
AutoFact: Light-harvesting chlorophyll a/b-binding protein of photosystem II n=1 Tax=Cryptomeria japonica RepID=O80388_CRYJA 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: chloroplast light harvesting chlorophyll a b binding partial 0.0
Putative C-terminus
sp_v2.0_unigene80985 SustainPine v2.0 506
AutoFact: Chlorophyll a-b binding protein type 2 member 2 (Fragment) n=5 Tax=Coniferales RepID=CB22_PINSY 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast light-harvesting chlorophyll a b-binding protein 0.0
C-terminus
sp_v2.0_unigene81007 SustainPine v2.0 232
AutoFact: Chlorophyll a-b binding protein, chloroplastic n=14 Tax=Triticeae RepID=CB21_WHEAT 3.0e-09
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Internal
sp_v2.0_unigene81071 SustainPine v2.0 419
AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 1.4013e-45
FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Blast2go: chloroplast light harvesting chlorophyll a b binding partial 0.0
N-terminus
sp_v2.0_unigene81129 SustainPine v2.0 954
AutoFact: Type II chlorophyll a /b-binding protein n=3 Tax=Pinaceae RepID=Q02070_PINSY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-harvesting complex i protein lhca2 0.0
C-terminus
sp_v2.0_unigene81297 SustainPine v2.0 317
AutoFact: LHC I type II chlorophyll binding protein (Fragment) n=1 Tax=Pinus sylvestris RepID=Q8RU80_PINSY 4.99983e-42
FL-Next: tr=Type II chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
Blast2go: lhca2 protein 1.04102e-41
Internal
sp_v2.0_unigene81401 SustainPine v2.0 383
AutoFact: Type II chlorophyll a /b-binding protein n=3 Tax=Pinaceae RepID=Q02070_PINSY 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chlorophyll binding protein 0.0
C-terminus
sp_v2.0_unigene81513 SustainPine v2.0 470
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 4.0e-27
FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1B, chloroplastic; Pinus sylvestris (Scots pine). 0.0
Blast2go: chloroplast light harvesting chlorophyll a b binding partial 4.71472e-35
Internal
sp_v2.0_unigene81603 SustainPine v2.0 506
AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: chloroplast light harvesting chlorophyll a b binding partial 0.0
Internal
sp_v2.0_unigene81647 SustainPine v2.0 880
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: chlorophyll a b binding 0.0
Complete
sp_v2.0_unigene81669 SustainPine v2.0 567
AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chlorophyll a b binding protein 0.0
C-terminus
sp_v2.0_unigene81772 SustainPine v2.0 834
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chlorophyll a b binding 0.0
Complete
sp_v2.0_unigene81791 SustainPine v2.0 577
AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast light harvesting chlorophyll a b binding partial 0.0
C-terminus
sp_v2.0_unigene81800 SustainPine v2.0 430
AutoFact: RecName: Full=Chlorophyll a-b binding protein, chloroplastic; AltName: Full=LHCII type I CAB; Short=LHCP; Flags: Precursor gb|AAB42157.1| chlorophyl-a/b-binding protein precursor [Silene latifolia subsp. alba] 8.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast chlorophyll a b binding protein 0.0
C-terminus
sp_v2.0_unigene81811 SustainPine v2.0 464
AutoFact: Light-harvesting chlorophyll-binding protein (Fragment) n=1 Tax=Citrus reticulata RepID=Q9AXP3_CITRE 1.0e-36
FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Blast2go: chloroplast light harvesting chlorophyll a b binding partial 6.42599e-37
C-terminus
sp_v2.0_unigene81897 SustainPine v2.0 725
AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chlorophyll a b binding 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain