Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: G-patch domain

Term: IPR000467  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1420 SustainPine v2.0 1831
AutoFact: DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana] sp|P42698.2|DR111_ARATH RecName: Full=DNA-damage-repair/toleration protein DRT111, chloroplastic; Flags: Precursor gb|AAF19751.1|AC009917_10 Strong similarity to gi|1169200 DNA-Damage-Repa 0.0
FL-Next: sp=DNA-damage-repair/toleration protein DRT111, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-damage-repair toleration protein drt111 0.0
Complete
sp_v2.0_unigene1691 SustainPine v2.0 1067
AutoFact: D111/G-patch; Zinc finger, C2H2-type n=1 Tax=Medicago truncatula RepID=Q2HRQ8_MEDTR 7.0e-32
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: d111 g-patch domain-containing protein 0.0
Complete
sp_v2.0_unigene1737 SustainPine v2.0 2296
AutoFact: dynamin-related protein 3A [Arabidopsis thaliana] sp|Q8S944.2|DRP3A_ARATH RecName: Full=Dynamin-related protein 3A; AltName: Full=Dynamin-like protein 2; AltName: Full=Dynamin-like protein 2a emb|CAA20578.1| Arabidopsis dynamin-like protein ADL2 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
Putative Complete
sp_v2.0_unigene3087 SustainPine v2.0 1052
AutoFact: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain [Arabidopsis thaliana] ref|NP_001078041.1| GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain [Arabidopsis thaliana] gb|AAD23716.1| hypothetic 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene8593 SustainPine v2.0 2959
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 5 10 0.0
Putative Complete
sp_v2.0_unigene8824 SustainPine v2.0 1530
AutoFact: D111/G-patch; Zinc finger, C2H2-type [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: d111 g-patch domain-containing protein 0.0
Complete
sp_v2.0_unigene10905 SustainPine v2.0 1233
AutoFact: Tuftelin interacting protein, putative n=1 Tax=Ricinus communis RepID=B9SDF9_RICCO 0.0
FL-Next: tr=Tuftelin interacting protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene11241 SustainPine v2.0 1195
AutoFact: Dynamin central region; Dynamin [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene11727 SustainPine v2.0 1821
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene13470 SustainPine v2.0 1907
AutoFact: Pin2-interacting protein x1, putative n=1 Tax=Ricinus communis RepID=B9T7Y1_RICCO 0.0
FL-Next: tr=Pin2-interacting protein x1, putative; Ricinus communis (Castor bean). 0.0
Blast2go: d111 g-patch domain-containing protein 0.0
Complete
sp_v2.0_unigene14453 SustainPine v2.0 1740
AutoFact: Zinc finger CCCH domain-containing protein 18 n=4 Tax=Oryza sativa RepID=C3H18_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger ccch domain-containing protein 18-like 0.0
Complete
sp_v2.0_unigene14456 SustainPine v2.0 1206
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RGI9_RICCO 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: d111 g-patch domain-containing protein 0.0
Complete
sp_v2.0_unigene15220 SustainPine v2.0 653
AutoFact: Diphthamide biosynthesis protein 1 n=3 Tax=Arabidopsis RepID=Q9FIT5_ARATH 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: at5g62030-like protein 2.98402e-36
C-terminus
sp_v2.0_unigene17233 SustainPine v2.0 2031
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swap domain-containing protein 0.0
Complete
sp_v2.0_unigene20139 SustainPine v2.0 277
AutoFact: NXRV123_F01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV123_F01 5' similar to Arabidopsis thaliana sequence At2g15410 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100249206 9.7425e-24
Putative N-terminus
sp_v2.0_unigene23503 SustainPine v2.0 1323
AutoFact: Probable protein phosphatase 2C 3 n=4 Tax=BEP clade RepID=P2C03_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene23984 SustainPine v2.0 472
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=C0PRI0_PICSI 0.0
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin- chloroplastic 0.0
C-terminus
sp_v2.0_unigene25975 SustainPine v2.0 1446
AutoFact: dynamin-like protein E [Arabidopsis thaliana] emb|CAB75934.1| dynamin-like protein 4 (ADL4) [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 1e 0.0
C-terminus
sp_v2.0_unigene26975 SustainPine v2.0 2369
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swap domain-containing protein 0.0
Complete
sp_v2.0_unigene28482 SustainPine v2.0 1286
AutoFact: Diphthamide biosynthesis protein 1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT0_PHYPA 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain