Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: G-patch domain

Term: IPR000467  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene71345 SustainPine v2.0 470
AutoFact: NXRV093_D07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV093_D07 5' similar to Arabidopsis thaliana sequence At2g06320 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100854167 1.55713e-36
Internal
sp_v2.0_unigene71429 SustainPine v2.0 271
AutoFact: RVT_1 domain containing protein 3.0e-10
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 8.96781e-34
Putative N-terminus
sp_v2.0_unigene73151 SustainPine v2.0 397
AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 1.0e-31
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 2.99034e-37
Putative N-terminus
sp_v2.0_unigene76810 SustainPine v2.0 1715
AutoFact: Aconitate hydratase, cytoplasmic n=8 Tax=rosids RepID=ACOC_CUCMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aconitate hydratase 0.0
N-terminus
sp_v2.0_unigene77515 SustainPine v2.0 607
AutoFact: DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana] sp|P42698.2|DR111_ARATH RecName: Full=DNA-damage-repair/toleration protein DRT111, chloroplastic; Flags: Precursor gb|AAF19751.1|AC009917_10 Strong similarity to gi|1169200 DNA-Damage-Repa 4.0e-36
FL-Next: sp=DNA-damage-repair/toleration protein DRT111, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-damage-repair toleration protein drt111 0.0
C-terminus
sp_v2.0_unigene78283 SustainPine v2.0 383
AutoFact: DNA-damage repair protein drt111, putative n=1 Tax=Ricinus communis RepID=B9SB37_RICCO 2.0e-08
FL-Next: sp=DNA-damage-repair/toleration protein DRT111, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v2.0_unigene78773 SustainPine v2.0 448
AutoFact: Arginine/serine rich splicing factor sf4/14, putative n=1 Tax=Ricinus communis RepID=B9RHH0_RICCO 2.0e-06
FL-Next: tr=Arginine/serine rich splicing factor sf4/14, putative; Ricinus communis (Castor bean). 0.0
Blast2go: arginine serine rich splicing factor sf4 5.00352e-07
Putative N-terminus
sp_v2.0_unigene80413 SustainPine v2.0 461
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=C0PTP5_PICSI 7.0e-21
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 1.06231e-26
Complete
sp_v2.0_unigene81316 SustainPine v2.0 462
AutoFact: Ferritin (Fragment) n=3 Tax=Pseudotsuga RepID=C6F952_PSEMZ 3.0e-36
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 0.0
C-terminus
sp_v2.0_unigene81599 SustainPine v2.0 320
AutoFact: Ferritin (Fragment) n=3 Tax=Pseudotsuga RepID=C6F952_PSEMZ 2.0e-26
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 3.47117e-28
C-terminus
sp_v2.0_unigene82939 SustainPine v2.0 445
AutoFact: putative protein phosphatase 2C 15 [Arabidopsis thaliana] ref|NP_001031252.1| putative protein phosphatase 2C 15 [Arabidopsis thaliana] sp|Q9M9C6.1|P2C15_ARATH RecName: Full=Probable protein phosphatase 2C 15; Short=AtPP2C15 gb|AAF26041.1|AC015986_4 putat 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ca2+ calmodulin-dependent protein kinase phosphatase 8.24374e-18
Internal
sp_v2.0_unigene82964 SustainPine v2.0 608
AutoFact: Probable protein phosphatase 2C 15 n=3 Tax=Arabidopsis RepID=P2C15_ARATH 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c 15 4.80211e-38
Internal
sp_v2.0_unigene86115 SustainPine v2.0 654
AutoFact: D111/G-patch domain-containing protein [Arabidopsis thaliana] gb|AAL06931.1| At1g63980/F22C12_9 [Arabidopsis thaliana] gb|AAO11605.1| At1g63980/F22C12_9 [Arabidopsis thaliana] gb|AEE34176.1| D111/G-patch domain-containing protein [Arabidopsis thaliana] 3.0e-38
FL-Next: tr=D111/G-patch domain-containing protein, putative, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: d111 g-patch domain-containing protein 1.56525e-42
Putative N-terminus
sp_v2.0_unigene92414 SustainPine v2.0 359
AutoFact: Ferritin (Fragment) n=7 Tax=Pinus RepID=Q06ZR8_PINTH 3.0e-20
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 6.56087e-27
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain