Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: G-patch domain

Term: IPR000467  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene29718 SustainPine v2.0 553
AutoFact: G patch domain-containing protein 1 [Arabidopsis thaliana] dbj|BAC42755.1| unknown protein [Arabidopsis thaliana] gb|AAP40415.1| unknown protein [Arabidopsis thaliana] gb|AED93116.1| G patch domain-containing protein 1 [Arabidopsis thaliana] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: g patch domain-containing protein 0.0
N-terminus
sp_v2.0_unigene30409 SustainPine v2.0 560
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 2.0e-39
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: rna-directed dna polymerase (reverse transcriptase) ribonuclease h 1.4013e-45
Putative N-terminus
sp_v2.0_unigene33130 SustainPine v2.0 1092
AutoFact: D111/G-patch domain-containing protein [Arabidopsis thaliana] emb|CAB36744.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79411.1| hypothetical protein [Arabidopsis thaliana] gb|ABI93912.1| At4g25020 [Arabidopsis thaliana] gb|AEE84992.1| D111/G-pat 1.0e-35
FL-Next: sp=Protein MOS2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein mos2-like 0.0
C-terminus
sp_v2.0_unigene35480 SustainPine v2.0 585
AutoFact: Protein MOS2, putative n=1 Tax=Ricinus communis RepID=B9SAH9_RICCO 5.0e-24
FL-Next: sp=Protein MOS2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein mos2-like 7.40664e-31
C-terminus
sp_v2.0_unigene36429 SustainPine v2.0 416
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: unnamed protein product [Vitis vinifera] 1.98271e-15
N-terminus
sp_v2.0_unigene38638 SustainPine v2.0 606
AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: catalytic region ribonuclease h 9.62819e-37
Putative Complete
sp_v2.0_unigene38649 SustainPine v2.0 549
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: gag pol polyprotein 0.0
Putative N-terminus
sp_v2.0_unigene38704 SustainPine v2.0 307
AutoFact: Os06g0489200 protein n=2 Tax=Oryza sativa RepID=Q67VW6_ORYSJ 7.0e-21
FL-Next: tr=Os06g0489200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: g patch domain-containing protein 1 2.17731e-24
Internal
sp_v2.0_unigene39632 SustainPine v2.0 621
AutoFact: Tuftelin interacting protein, putative n=1 Tax=Ricinus communis RepID=B9SDF9_RICCO 4.0e-12
FL-Next: sp=Zinc finger CCCH domain-containing protein 22; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 4.42842e-13
Internal
sp_v2.0_unigene40238 SustainPine v2.0 393
AutoFact: Dynamin central region; Dynamin [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene41446 SustainPine v2.0 559
AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 7.0e-30
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: catalytic region ribonuclease h 1.40689e-35
C-terminus
sp_v2.0_unigene47324 SustainPine v2.0 362
AutoFact: similar to dynamin-like protein encoded by GenBank Accession Number X99669 [Arabidopsis thaliana] 3.0e-07
FL-Next: Isoform 2 of Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A 0.0
Blast2go: dynamin like protein 2a 1.18771e-09
N-terminus
sp_v2.0_unigene51875 SustainPine v2.0 507
AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 1.0e-36
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 5.48468e-42
Putative Complete
sp_v2.0_unigene53005 SustainPine v2.0 527
AutoFact: RVT_1 domain containing protein 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100259900 0.0
Putative Complete
sp_v2.0_unigene60054 SustainPine v2.0 336
AutoFact: WS0346.C21_E20 WS-SE-N-A-19 Picea glauca cDNA clone WS0346_E20 3, mRNA sequence. 0.0
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: uncharacterized protein loc100853628 3.02899e-28
Internal
sp_v2.0_unigene61584 SustainPine v2.0 692
AutoFact: RVT_1 domain containing protein 8.0e-09
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100259900 0.0
N-terminus
sp_v2.0_unigene61924 SustainPine v2.0 860
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=B8LPN3_PICSI 0.0
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 1a 0.0
C-terminus
sp_v2.0_unigene62371 SustainPine v2.0 1178
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 6.0e-35
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: splicing factor 4-like protein 3.78351e-44
N-terminus
sp_v2.0_unigene69437 SustainPine v2.0 270
AutoFact: putative GTP-binding protein [Oryza sativa Japonica Group] gb|ABF98531.1| Dynamin-related protein 1C, putative, expressed [Oryza sativa Japonica Group] dbj|BAH01687.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEC76063.1| hypothetical prote 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.00771e-43
Internal
sp_v2.0_unigene71084 SustainPine v2.0 262
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: af378049_1reverse transcriptase 1.08763e-30
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain