Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Nucleotide-binding, alpha-beta plait

Term: IPR012677  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene6059 SustainPine v2.0 2523
AutoFact: putative RNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein 0.0
Complete
sp_v2.0_unigene6081 SustainPine v2.0 603
AutoFact: protein terminal ear1 [Zea mays] sp|O65001.1|TE1_MAIZE RecName: Full=Protein terminal ear1 gb|AAK29419.1|AF348319_1 TERMINAL EAR1 [Zea mays] gb|AAC39463.1| terminal ear1 [Zea mays] 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.56327e-16
Internal
sp_v2.0_unigene6258 SustainPine v2.0 1531
AutoFact: Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Picea sitchensis RepID=A9NNT0_PICSI 0.0
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit G; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: initiation factor 3g 0.0
Complete
sp_v2.0_unigene6272 SustainPine v2.0 1880
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich-splicing factor rsp40-like 0.0
Putative Complete
sp_v2.0_unigene6301 SustainPine v2.0 3306
AutoFact: pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alkaline alpha galactosidase 0.0
Complete
sp_v2.0_unigene6408 SustainPine v2.0 2083
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3Y1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Complete
sp_v2.0_unigene6460 SustainPine v2.0 398
AutoFact: RNA-dependent RNA polymerase n=2 Tax=Gossypium hirsutum RepID=B2B9K0_GOSHI 3.0e-39
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 4.2039e-45
Internal
sp_v2.0_unigene6471 SustainPine v2.0 2094
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene6480 SustainPine v2.0 1226
AutoFact: Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Nicotiana tabacum RepID=EIF3B_TOBAC 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit b 0.0
Putative Complete
sp_v2.0_unigene6558 SustainPine v2.0 1993
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
Complete
sp_v2.0_unigene6563 SustainPine v2.0 965
AutoFact: RecName: Full=Metal transporter Nramp3; Short=OsNramp3 dbj|BAD45911.1| putative NRAMP metal ion transporter 1 [Oryza sativa Japonica Group] gb|EAZ02068.1| hypothetical protein OsI_24146 [Oryza sativa Indica Group] gb|EAZ38005.1| hypothetical protein OsJ_2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: metal transporter nramp6 0.0
Putative N-terminus
sp_v2.0_unigene6611 SustainPine v2.0 2176
AutoFact: putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] gb|AAK63859.1|AF389287_1 At1g05170/YUP8H12_22 [Arabidopsis thaliana] gb|AAB71461.1| Similar to Sequence 10 from patent 5477002 (gb|1253956) [Arabidopsis thaliana] gb|AAM47315.1| At1g05170/YU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactosyltransferase family protein 0.0
Complete
sp_v2.0_unigene6656 SustainPine v2.0 749
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb06g027580; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: rna recognition motif-containing protein 5.93394e-41
C-terminus
sp_v2.0_unigene6660 SustainPine v2.0 1417
AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gb|AEE83159.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene6661 SustainPine v2.0 935
AutoFact: Protein terminal ear1 homolog n=2 Tax=Oryza sativa RepID=EAR1_ORYSJ 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: terminal ear1 2.38221e-44
Putative C-terminus
sp_v2.0_unigene6747 SustainPine v2.0 1052
AutoFact: RRM_1 domain containing protein 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyadenylate-binding protein 0.0
C-terminus
sp_v2.0_unigene6751 SustainPine v2.0 2405
AutoFact: U snRNP-associated cyclophilin-like protein [Schistosoma mansoni] 0.0001
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 8.2084e-08
C-terminus
sp_v2.0_unigene6841 SustainPine v2.0 1188
AutoFact: Drf_FH1 multi-domain protein 6.0e-17
Coding
sp_v2.0_unigene6900 SustainPine v2.0 937
AutoFact: Sex determining protein n=3 Tax=Mus musculus musculus RepID=O35861_MOUSE 5.0e-20
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: sex determining protein 1.52923e-22
Putative C-terminus
sp_v2.0_unigene6985 SustainPine v2.0 727
AutoFact: aminopeptidase M1 [Arabidopsis thaliana] gb|AAL38379.1| AT4g33090/F4I10_20 [Arabidopsis thaliana] gb|AAN41401.1| aminopeptidase M [Arabidopsis thaliana] gb|AAO64746.1| At4g33090/F4I10_20 [Arabidopsis thaliana] dbj|BAE99157.1| aminopeptidase like protein [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: puromycin-sensitive aminopeptidase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain