Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Nucleotide-binding, alpha-beta plait

Term: IPR012677  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene85044 SustainPine v2.0 1355
AutoFact: strictosidine synthase-like 3 [Arabidopsis thaliana] gb|AAL31926.1|AF419594_1 At1g08470/T27G7_9 [Arabidopsis thaliana] gb|AAL36403.1| unknown protein [Arabidopsis thaliana] gb|AAM51389.1| unknown protein [Arabidopsis thaliana] gb|AEE28296.1| strictosidine 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: strictosidine synthase family protein 0.0
Putative Complete
sp_v2.0_unigene85340 SustainPine v2.0 677
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
C-terminus
sp_v2.0_unigene85355 SustainPine v2.0 528
AutoFact: heterogeneous nuclear ribonucleoprotein R [Mus musculus] 5.0e-07
FL-Next: tr=Putative uncharacterized protein Sb08g019140; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein r 9.09128e-37
Internal
sp_v2.0_unigene85360 SustainPine v2.0 890
AutoFact: RecName: Full=Histidine-rich glycoprotein; Flags: Precursor emb|CAA25698.1| histidine-rich protein [Plasmodium lophurae] prf||1101401A protein,His rich 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical repeat protein 2.17804e-27
C-terminus
sp_v2.0_unigene85419 SustainPine v2.0 1027
AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor 1 0.0
Putative C-terminus
sp_v2.0_unigene85669 SustainPine v2.0 1186
AutoFact: nucleic acid binding protein1 [Zea mays] gb|AAA33486.1| nucleic acid-binding protein [Zea mays] gb|ACG38158.1| ribonucleoprotein [Zea mays] gb|ACL52389.1| unknown [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid-binding protein 0.0
Putative Complete
sp_v2.0_unigene85698 SustainPine v2.0 1079
AutoFact: DUF1183 domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein q 0.0
C-terminus
sp_v2.0_unigene85708 SustainPine v2.0 782
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tho complex subunit 0.0
C-terminus
sp_v2.0_unigene85775 SustainPine v2.0 685
AutoFact: U2 auxiliary factor small subunit [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
N-terminus
sp_v2.0_unigene85819 SustainPine v2.0 522
AutoFact: Chloroplast RNA binding protein n=1 Tax=Phaseolus vulgaris RepID=Q41124_PHAVU 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene85850 SustainPine v2.0 897
AutoFact: putative type 1 RNA helicase [Oryza sativa Japonica Group] gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulator of nonsense transcripts 1 homolog 0.0
Putative N-terminus
sp_v2.0_unigene85915 SustainPine v2.0 756
AutoFact: Gly_rich multi-domain protein 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 3.73816e-13
Internal
sp_v2.0_unigene86100 SustainPine v2.0 130
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 6.4071e-12
Internal
sp_v2.0_unigene86142 SustainPine v2.0 1020
AutoFact: MEI2-like protein 4 [Arabidopsis thaliana] sp|Q9LYN7.1|AML4_ARATH RecName: Full=Protein MEI2-like 4; Short=AML4; AltName: Full=MEI2-like protein 4 emb|CAB87285.1| Mei2-like protein [Arabidopsis thaliana] dbj|BAE99028.1| Mei2-like protein [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein mei2-like 4-like 0.0
C-terminus
sp_v2.0_unigene86174 SustainPine v2.0 262
AutoFact: Poly(A)-binding protein n=1 Tax=Glycine max RepID=Q00M91_SOYBN 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding protein 4.0947e-23
C-terminus
sp_v2.0_unigene86254 SustainPine v2.0 793
AutoFact: 7TM_GPCR_Srz multi-domain protein 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
N-terminus
sp_v2.0_unigene86371 SustainPine v2.0 1151
AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IKW9_POPTR 0.0
FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 6 0.0
C-terminus
sp_v2.0_unigene86419 SustainPine v2.0 1129
AutoFact: RNA-binding protein [Medicago truncatula] 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene87110 SustainPine v2.0 723
AutoFact: Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Picea sitchensis RepID=A9NNT0_PICSI 0.0
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit G; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: initiation factor 3g 0.0
N-terminus
sp_v2.0_unigene87813 SustainPine v2.0 616
AutoFact: Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Picea sitchensis RepID=A9NNT0_PICSI 2.0e-15
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit G; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: initiation factor 3g 1.3992e-17
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain