Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Nucleotide-binding, alpha-beta plait

Term: IPR012677  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3682 SustainPine v2.0 909
AutoFact: Metal transporter Nramp1 n=9 Tax=Brassicaceae RepID=NRAM1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: metal ion transporter 0.0
C-terminus
sp_v2.0_unigene3697 SustainPine v2.0 742
AutoFact: Putative RRM-containing protein SEB-4 n=3 Tax=Poaceae RepID=Q5N8W4_ORYSJ 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
C-terminus
sp_v2.0_unigene3701 SustainPine v2.0 1465
AutoFact: Os03g0374575 protein n=4 Tax=Oryza sativa RepID=C7J0R1_ORYSJ 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing arginine serine-rich 4 0.0
Complete
sp_v2.0_unigene3773 SustainPine v2.0 1860
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SEZ1_RICCO 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
C-terminus
sp_v2.0_unigene3790 SustainPine v2.0 1388
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene3986 SustainPine v2.0 2484
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB10647.1| unnamed protein product [Arabidopsis thaliana] gb|AAL32982.1| AT5g60980/MSL3_100 [Arabidopsis thaliana] gb|AAO23575.1| At5g60980/MSL3_100 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Complete
sp_v2.0_unigene4026 SustainPine v2.0 2071
AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u1 small nuclear ribonucleoprotein-70k 0.0
N-terminus
sp_v2.0_unigene4161 SustainPine v2.0 1132
AutoFact: Strictosidine synthase, putative n=1 Tax=Ricinus communis RepID=B9RJ21_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: strictosidine synthase family protein 0.0
N-terminus
sp_v2.0_unigene4226 SustainPine v2.0 2486
AutoFact: putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene4251 SustainPine v2.0 1736
AutoFact: ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich splicing 0.0
Complete
sp_v2.0_unigene4282 SustainPine v2.0 537
AutoFact: PREDICTED: similar to RNA recognition motif (RRM)-containing protein n=1 Tax=Vitis vinifera RepID=UPI000198579B 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna binding 2.8026e-45
Internal
sp_v2.0_unigene4317 SustainPine v2.0 1707
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AEE35845.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
sp_v2.0_unigene4383 SustainPine v2.0 967
AutoFact: Ribonucleoprotein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RAR1_RICCO 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
C-terminus
sp_v2.0_unigene4396 SustainPine v2.0 1379
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
sp_v2.0_unigene4432 SustainPine v2.0 1260
AutoFact: Flowering time control protein-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZL31_PICSI 7.0e-11
FL-Next: Isoform Alpha of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein 2.21199e-12
C-terminus
sp_v2.0_unigene4435 SustainPine v2.0 627
AutoFact: tRNA nucleotidyltransferase (CCA-adding enzyme) [Arabidopsis thaliana] gb|AEE30912.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Arabidopsis thaliana] 9.99967e-42
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: trna nucleotidyltransferase (cca-adding enzyme) 0.0
Internal
sp_v2.0_unigene4560 SustainPine v2.0 1098
AutoFact: Peroxidase 10, putative n=1 Tax=Ricinus communis RepID=B9S775_RICCO 0.0
FL-Next: tr=Properoxidase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: peroxidase 10-like 0.0
C-terminus
sp_v2.0_unigene4695 SustainPine v2.0 1651
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAD94469.1| putative RNA-binding protein [Arabidopsis thaliana] dbj|BAF01884.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AEC10093.1| RNA recognition motif-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein with multiple splicing 0.0
C-terminus
sp_v2.0_unigene4746 SustainPine v2.0 1713
AutoFact: MEI2-like protein 4 [Arabidopsis thaliana] sp|Q9LYN7.1|AML4_ARATH RecName: Full=Protein MEI2-like 4; Short=AML4; AltName: Full=MEI2-like protein 4 emb|CAB87285.1| Mei2-like protein [Arabidopsis thaliana] dbj|BAE99028.1| Mei2-like protein [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein mei2-like 4-like 0.0
C-terminus
sp_v2.0_unigene4759 SustainPine v2.0 594
AutoFact: RNA-binding protein n=1 Tax=Nicotiana tabacum RepID=Q941H9_TOBAC 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycine-rich rna-binding 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain