Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, CCCH-type

Term: IPR000571  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene59117 SustainPine v2.0 296
AutoFact: DUF1777 multi-domain protein 6.0e-10
Coding
sp_v2.0_unigene59375 SustainPine v2.0 888
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene59426 SustainPine v2.0 558
AutoFact: DNA binding / nucleic acid binding / protein binding / zinc ion binding 3.0e-10
FL-Next: sp=Zinc finger CCCH domain-containing protein 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 5.76748e-16
Internal
sp_v2.0_unigene59749 SustainPine v2.0 994
AutoFact: WS02722.C21_G05 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02722_G05 5, mRNA sequence. 0.0
Coding
sp_v2.0_unigene59976 SustainPine v2.0 840
AutoFact: zinc finger CCCH domain-containing protein 64 [Arabidopsis thaliana] sp|Q84WU9.1|C3H64_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 64; Short=AtC3H64 gb|AAO22569.1| unknown protein [Arabidopsis thaliana] gb|AED96821.1| zinc finger CCCH d 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 64; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 64-like 0.0
N-terminus
sp_v2.0_unigene60194 SustainPine v2.0 1187
AutoFact: putative U2 snRNP auxiliary factor [Chenopodium rubrum] 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
C-terminus
sp_v2.0_unigene60575 SustainPine v2.0 925
AutoFact: RecName: Full=Zinc finger CCCH domain-containing protein 14; Short=OsC3H14 dbj|BAD15406.1| KH domain-containing protein-like [Oryza sativa Japonica Group] gb|EAY84850.1| hypothetical protein OsI_06216 [Oryza sativa Indica Group] gb|EAZ22072.1| hypothetica 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene61132 SustainPine v2.0 826
AutoFact: Iron-inhibited ABC transporter (Fragment) n=3 Tax=Pinaceae RepID=C6F6D7_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
C-terminus
sp_v2.0_unigene61517 SustainPine v2.0 1320
AutoFact: Phosphofructokinase, putative n=1 Tax=Ricinus communis RepID=B9RRX6_RICCO 0.0
FL-Next: sp=6-phosphofructokinase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 6-phosphofructokinase 3-like 0.0
Internal
sp_v2.0_unigene61541 SustainPine v2.0 486
AutoFact: GRP multi-domain protein 2.0e-13
unknown
sp_v2.0_unigene62041 SustainPine v2.0 373
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase 2.00111e-40
C-terminus
sp_v2.0_unigene63334 SustainPine v2.0 522
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAR2_RICCO 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 4; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger ccch domain-containing protein 31 0.0
N-terminus
sp_v2.0_unigene63384 SustainPine v2.0 398
AutoFact: Root phototropism protein, putative n=1 Tax=Ricinus communis RepID=B9SKU3_RICCO 9.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: btb poz domain-containing protein at1g30440-like 8.08468e-37
Internal
sp_v2.0_unigene64245 SustainPine v2.0 492
AutoFact: putative receptor protein kinase [Oryza sativa Japonica Group] 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cysteine-rich receptor-like protein kinase 2 8.41573e-20
Internal
sp_v2.0_unigene64401 SustainPine v2.0 601
AutoFact: PREDICTED: zinc finger matrin-type protein 5 isoform 4 [Pan troglodytes] ref|XP_515063.2| PREDICTED: zinc finger matrin-type protein 5 isoform 5 [Pan troglodytes] ref|XP_001136635.2| PREDICTED: zinc finger matrin-type protein 5 isoform 1 [Pan troglodytes] 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding zinc ion binding protein 8.68805e-44
Complete
sp_v2.0_unigene64731 SustainPine v2.0 947
AutoFact: Zinc finger C-x8-C-x5-C-x3-H type family protein n=1 Tax=Zea mays RepID=B6U194_MAIZE 6.0e-35
FL-Next: sp=Zinc finger CCCH domain-containing protein 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger c-x8-c-x5-c-x3-h type family protein 3.22308e-39
Internal
sp_v2.0_unigene67500 SustainPine v2.0 454
AutoFact: cysteine-rich receptor-like protein kinase 3 [Arabidopsis thaliana] sp|Q9CAL2.1|CRK3_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 3; Short=Cysteine-rich RLK3; Flags: Precursor gb|AAG52470.1|AC010796_9 putative protein kinase; 41292-38663 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.86775e-22
Internal
sp_v2.0_unigene67802 SustainPine v2.0 493
AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene67889 SustainPine v2.0 336
AutoFact: putative receptor ser/thr protein [Oryza sativa Japonica Group] gb|ABF95119.1| Protein kinase domain containing protein, expressed [Oryza sativa Japonica Group] 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene69216 SustainPine v2.0 242
AutoFact: similar to putative receptor protein kinase from A. thaliana [Hordeum vulgare subsp. vulgare] 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase 7.63921e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain