Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Zinc finger, CCCH-type

Term: IPR000571  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene32260 SustainPine v2.0 358
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9SNT2_RICCO 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 56-like 9.12601e-32
Internal
sp_v2.0_unigene33387 SustainPine v2.0 649
AutoFact: WS0381.C21_G06 SS-B-23 Picea sitchensis cDNA clone WS0381_G06 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 13-like 1.20262e-35
N-terminus
sp_v2.0_unigene33470 SustainPine v2.0 1018
AutoFact: pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis thaliana] sp|Q9LNV5.1|C3H4_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 4; Short=AtC3H4 gb|AAF79557.1|AC022464_15 F22G5.30 [Arabidopsis thaliana] gb|AEE28114.1| pre-mRNA-splicing factor R 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger ccch domain-containing protein 40-like 0.0
Complete
sp_v2.0_unigene34172 SustainPine v2.0 841
AutoFact: zinc finger CCCH domain-containing protein 31 [Arabidopsis thaliana] sp|O22243.2|C3H31_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 31; Short=AtC3H31 gb|AAC63624.1| putative ATP-dependent RNA helicase A [Arabidopsis thaliana] dbj|BAH3043 2.0e-23
FL-Next: sp=Zinc finger CCCH domain-containing protein 31; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 31 9.62205e-33
C-terminus
sp_v2.0_unigene34254 SustainPine v2.0 447
AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 7.88984e-14
Putative N-terminus
sp_v2.0_unigene34499 SustainPine v2.0 391
AutoFact: C3HL domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIV4_MALDO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger transcription factor-like protein 1.26802e-38
Internal
sp_v2.0_unigene35199 SustainPine v2.0 677
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger CCCH domain-containing protein 41; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.61149e-43
N-terminus
sp_v2.0_unigene35639 SustainPine v2.0 320
AutoFact: RecName: Full=Zinc finger CCCH domain-containing protein 4; Short=OsC3H4 dbj|BAE95808.1| ATP-dependent RNA helicase A -like [Oryza sativa Japonica Group] 1.0e-16
FL-Next: sp=Zinc finger CCCH domain-containing protein 4; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger ccch domain-containing protein 31 1.04514e-24
Putative C-terminus
sp_v2.0_unigene35686 SustainPine v2.0 299
AutoFact: RRM-containing RNA-binding protein-like protein n=2 Tax=Solanum tuberosum RepID=Q2PYX8_SOLTU 1.0e-07
FL-Next: sp=Zinc finger CCCH domain-containing protein 40; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: hypothetical protein OsI_21840 [Oryza sativa Indica Group] 7.8009e-10
N-terminus
sp_v2.0_unigene35930 SustainPine v2.0 1754
AutoFact: ABC transporter family protein n=2 Tax=Malpighiales RepID=B9GL16_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family protein 0.0
Complete
sp_v2.0_unigene36216 SustainPine v2.0 838
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7W6_RICCO 1.0e-21
FL-Next: sp=Zinc finger CCCH domain-containing protein 46; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 53-like 1.18683e-23
N-terminus
sp_v2.0_unigene36756 SustainPine v2.0 706
AutoFact: Ank_2 domain containing protein 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.5035e-33
Putative N-terminus
sp_v2.0_unigene36865 SustainPine v2.0 469
AutoFact: Putative Receptor-like serine/threonine kinase(RFK1) n=2 Tax=Oryza sativa Japonica Group RepID=Q7F106_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal
sp_v2.0_unigene37176 SustainPine v2.0 510
AutoFact: zinc finger CCCH domain-containing protein 6 [Arabidopsis thaliana] sp|Q56XU4.1|C3H6_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 6; Short=AtC3H6 dbj|BAD95060.1| hypothetical protein [Arabidopsis thaliana] gb|ABF58975.1| At1g19860 [Arabi 9.0e-18
FL-Next: sp=Zinc finger CCCH domain-containing protein 30; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger c-x8-c-x5-c-x3-h type family protein 2.92559e-35
N-terminus
sp_v2.0_unigene38150 SustainPine v2.0 509
AutoFact: zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group] 3.0e-40
FL-Next: sp=Zinc finger CCCH domain-containing protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene38169 SustainPine v2.0 366
AutoFact: endoribonuclease/protein kinase IRE1 [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein inositol requiring 1-1 0.0
Internal
sp_v2.0_unigene38227 SustainPine v2.0 553
AutoFact: 6-phosphofructokinase 2 [Arabidopsis thaliana] sp|Q9FIK0.1|K6PF2_ARATH RecName: Full=6-phosphofructokinase 2; AltName: Full=Phosphofructokinase 2; AltName: Full=Phosphohexokinase 2 dbj|BAB11328.1| pyrophosphate-fructose-6-phosphate 1-phosphotransferase-li 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene38496 SustainPine v2.0 461
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSJ9_RICCO 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein zfn-like 7.59613e-39
N-terminus
sp_v2.0_unigene38622 SustainPine v2.0 426
AutoFact: Zinc finger CCCH domain-containing protein 42 n=1 Tax=Arabidopsis thaliana RepID=C3H42_ARATH 2.0e-27
FL-Next: sp=Zinc finger CCCH domain-containing protein 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-binding motif x-linked 2 2.28131e-34
N-terminus
sp_v2.0_unigene40486 SustainPine v2.0 561
AutoFact: zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] sp|Q9FNZ1.1|C3H63_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 63; Short=AtC3H63; AltName: Full=Zinc finger CCCH domain and WD40 repeat-containing protein 2 emb|CAC1984 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 63 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain