Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, CCCH-type

Term: IPR000571  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene26003 SustainPine v2.0 681
AutoFact: zinc finger CCCH domain-containing protein 40 [Arabidopsis thaliana] sp|Q93XW7.1|C3H40_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 40; Short=AtC3H40 gb|AAL24381.1| Unknown protein [Arabidopsis thaliana] gb|AAM91191.1| unknown protein [A 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 40 0.0
Internal
sp_v2.0_unigene26438 SustainPine v2.0 846
AutoFact: E3 ubiquitin-protein ligase makorin [Arabidopsis thaliana] ref|NP_974255.1| E3 ubiquitin-protein ligase makorin [Arabidopsis thaliana] sp|Q6IDS6.1|C3H35_ARATH RecName: Full=E3 ubiquitin-protein ligase makorin; AltName: Full=Zinc finger CCCH domain-contain 4.0e-23
FL-Next: sp=E3 ubiquitin-protein ligase makorin; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: e3 ubiquitin-protein ligase makorin 9.26154e-36
C-terminus
sp_v2.0_unigene27063 SustainPine v2.0 1492
AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
Putative Complete
sp_v2.0_unigene27147 SustainPine v2.0 1530
AutoFact: BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: btb poz domain-containing protein at5g66560-like 0.0
C-terminus
sp_v2.0_unigene27700 SustainPine v2.0 1644
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: yt521-b-like protein 0.0
Complete
sp_v2.0_unigene27881 SustainPine v2.0 439
AutoFact: Putative zinc finger protein [Arabidopsis thaliana] 2.0e-11
FL-Next: sp=Zinc finger CCCH domain-containing protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ring finger protein 5.94234e-28
Internal
sp_v2.0_unigene27891 SustainPine v2.0 1843
AutoFact: Makorin-1, putative n=1 Tax=Ricinus communis RepID=B9SL96_RICCO 0.0
FL-Next: sp=E3 ubiquitin-protein ligase makorin; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ccch-type zinc finger protein c3h69 0.0
Complete
sp_v2.0_unigene27950 SustainPine v2.0 1229
AutoFact: zf-CCCH domain containing protein 5.0e-05
FL-Next: Isoform 2 of Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica GN=Os03g0328900 0.0
Blast2go: zinc finger ccch domain-containing protein 53-like 0.0
Internal
sp_v2.0_unigene28057 SustainPine v2.0 573
AutoFact: YTH domain containing protein 2.0e-20
FL-Next: sp=Cleavage and polyadenylation specificity factor CPSF30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene28490 SustainPine v2.0 1052
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene28646 SustainPine v2.0 1168
AutoFact: Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] emb|CAL57619.1| Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] 1.99965e-42
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene29031 SustainPine v2.0 549
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9SL49_RICCO 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 30-like 1.4013e-45
Internal
sp_v2.0_unigene29200 SustainPine v2.0 914
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phototropic-responsive nph3 family protein 1.10614e-30
Putative C-terminus
sp_v2.0_unigene30122 SustainPine v2.0 456
AutoFact: Zinc finger CCCH domain-containing protein 17 n=4 Tax=Oryza sativa RepID=C3H17_ORYSJ 8.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 63 7.22396e-30
C-terminus
sp_v2.0_unigene30169 SustainPine v2.0 356
AutoFact: GAUT13; GAUT13 (Galacturonosyltransferase 13); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups (EC:2.4.1.43); K13648 alpha-1,4-galacturonosyltransferase [EC:2.4.1.43 5.0e-28
FL-Next: Isoform 2 of Probable galacturonosyltransferase 13 OS=Arabidopsis thaliana GN=GAUT13 0.0
Blast2go: alpha- -galacturonosyltransferase 5.56207e-35
Internal
sp_v2.0_unigene30468 SustainPine v2.0 592
AutoFact: plastocyanin-like domain-containing protein [Arabidopsis thaliana] gb|AAB95306.1| putative phytocyanin [Arabidopsis thaliana] gb|AEC07879.1| plastocyanin-like domain-containing protein [Arabidopsis thaliana] 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastocyanin-like domain-containing protein 3.72481e-34
N-terminus
sp_v2.0_unigene31023 SustainPine v2.0 1301
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor u2af small subunit b-like 0.0
C-terminus
sp_v2.0_unigene31220 SustainPine v2.0 361
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger CCCH domain-containing protein 41; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.06163e-15
Internal
sp_v2.0_unigene32064 SustainPine v2.0 381
AutoFact: receptor ser/thr protein kinase-like [Oryza sativa Japonica Group] dbj|BAD25902.1| receptor ser/thr protein kinase-like [Oryza sativa Japonica Group] 7.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase family protein 0.0
Internal
sp_v2.0_unigene32071 SustainPine v2.0 298
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.72623e-44
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain