Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene10651 SustainPine v2.0 2234
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AAC98059.1| chloroplast lumen common protein family [Arabidopsis thaliana] gb|ABI49479.1| At2g37400 [Arabidopsis thaliana] gb|AEC09393.1| tetratricopeptide repeat domain-containi 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene10703 SustainPine v2.0 638
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.2045e-20
C-terminus
sp_v2.0_unigene10742 SustainPine v2.0 571
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at4g02750-like 0.0
Internal
sp_v2.0_unigene10861 SustainPine v2.0 992
AutoFact: pfam12819, Malectin_like, Carbohydrate-binding protein of the ER 3.0e-28
FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: receptor-like protein kinase theseus 1-like 0.0
N-terminus
sp_v2.0_unigene11021 SustainPine v2.0 706
AutoFact: tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] ref|NP_173210.3| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] gb|AAN86156.1| unknown protein [Arabidopsis thaliana] gb|AEE29620.1| tetratricopeptide repea 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: general transcription factor 3c polypeptide 3-like 0.0
C-terminus
sp_v2.0_unigene11170 SustainPine v2.0 1945
AutoFact: Peptidyl-prolyl cis-trans isomerase d, ppid, putative n=1 Tax=Ricinus communis RepID=B9S777_RICCO 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase cyp40 0.0
Complete
sp_v2.0_unigene11248 SustainPine v2.0 912
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene11262 SustainPine v2.0 846
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AAU94374.1| At1g56440 [Arabidopsis thaliana] gb|AAX12885.1| At1g56440 [Arabidopsis thaliana] dbj|BAE99447.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33395.1| tetratrico 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase ii-associated protein 3-like 0.0
Putative N-terminus
sp_v2.0_unigene11270 SustainPine v2.0 550
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] dbj|BAB10514.1| unnamed protein product [Arabidopsis thaliana] gb|AED92407.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tetratricopeptide repeat-containing protein 5.0184e-36
C-terminus
sp_v2.0_unigene11450 SustainPine v2.0 594
AutoFact: PPR_1 domain containing protein 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at4g02750-like 0.0
Internal
sp_v2.0_unigene11485 SustainPine v2.0 788
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SNN7_RICCO 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Putative N-terminus
sp_v2.0_unigene11537 SustainPine v2.0 1937
AutoFact: E3 ubiquitin-protein ligase CHIP [Arabidopsis thaliana] sp|Q9SRS9.1|CHIP_ARATH RecName: Full=E3 ubiquitin-protein ligase CHIP; AltName: Full=Carboxyl terminus of HSC70-interacting protein; Short=AtCHIP; AltName: Full=Plant U-box protein 61; AltName: Full= 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase chip 0.0
Complete
sp_v2.0_unigene11546 SustainPine v2.0 1434
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ricinus communis RepID=B9T6J3_RICCO 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase cyp19-4-like 0.0
Complete
sp_v2.0_unigene11621 SustainPine v2.0 1737
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62470, mitochondrial; Flags: Precursor emb|CAB82961.1| putative protein [Arabidopsis thaliana] gb|AAQ6 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative Complete
sp_v2.0_unigene11665 SustainPine v2.0 697
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb04g024620; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 1.25868e-28
N-terminus
sp_v2.0_unigene11880 SustainPine v2.0 3052
AutoFact: putative pre-mRNA splicing factor [Oryza sativa Japonica Group] gb|AAP54456.1| U5 snRNP-associated 102 kDa protein, putative, expressed [Oryza sativa Japonica Group] gb|EAY79087.1| hypothetical protein OsI_34194 [Oryza sativa Indica Group] 0.0
FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: pre-mrna splicing factor 0.0
Complete
sp_v2.0_unigene11899 SustainPine v2.0 999
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
sp_v2.0_unigene11907 SustainPine v2.0 624
AutoFact: pfam12854, PPR_1, PPR repeat 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene11942 SustainPine v2.0 735
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: general transcription factor 3c polypeptide 3-like 0.0
Internal
sp_v2.0_unigene11948 SustainPine v2.0 619
AutoFact: Brushy protein, putative n=1 Tax=Ricinus communis RepID=B9RTZ8_RICCO 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein brushy 1.4013e-45
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain