Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene8550 SustainPine v2.0 929
AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene8811 SustainPine v2.0 1076
AutoFact: Tetratricopeptide repeat domain protein n=2 Tax=Arabidopsis RepID=F4JKH6_ARATH 0.0
FL-Next: tr=Eukaryotic translation initiation factor 3 subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein kiaa0664 homolog 0.0
Internal
sp_v2.0_unigene8964 SustainPine v2.0 1400
AutoFact: receptor protein kinase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g06840-like 0.0
Putative C-terminus
sp_v2.0_unigene9023 SustainPine v2.0 3008
AutoFact: Isoform 2 of Serine/threonine-protein phosphatase 5 n=1 Tax=Solanum lycopersicum RepID=Q84K11-2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein phosphatase 5 0.0
Complete
sp_v2.0_unigene9070 SustainPine v2.0 1629
AutoFact: Calcium-binding tetratricopeptide family protein [Arabidopsis thaliana] sp|O23052.1|Y1515_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein At1g05150 gb|AAB71463.1| Contains similarity to Rattus O-GlcNAc transferase (gb|U76557) [Arabidopsi 0.0
FL-Next: sp=Uncharacterized TPR repeat-containing protein At1g05150; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized tpr repeat-containing protein at1g05150-like 0.0
C-terminus
sp_v2.0_unigene9231 SustainPine v2.0 871
AutoFact: Tetratricopeptide repeat protein, tpr, putative n=1 Tax=Ricinus communis RepID=B9R838_RICCO 0.0
FL-Next: sp=Uncharacterized TPR repeat-containing protein At2g32450; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: o- c transferase 0.0
Internal
sp_v2.0_unigene9477 SustainPine v2.0 2551
AutoFact: Pyruvate kinase n=2 Tax=Populus trichocarpa RepID=B9HKC4_POPTR 0.0
FL-Next: sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pyruvate kinase 0.0
Complete
sp_v2.0_unigene9558 SustainPine v2.0 1960
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at1g67340-like 0.0
Complete
sp_v2.0_unigene9570 SustainPine v2.0 1349
AutoFact: GDSL-lipase 1 [Capsicum annuum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene9720 SustainPine v2.0 794
AutoFact: OTU-like cysteine protease-like [Oryza sativa Japonica Group] dbj|BAD23097.1| OTU-like cysteine protease-like [Oryza sativa Japonica Group] dbj|BAG91428.1| unnamed protein product [Oryza sativa Japonica Group] dbj|BAG99627.1| unnamed protein product [Oryz 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.1597e-32
C-terminus
sp_v2.0_unigene9829 SustainPine v2.0 1226
AutoFact: RING-H2 subgroup RHE protein [Populus tremula x Populus alba] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl3c 0.0
Complete
sp_v2.0_unigene9915 SustainPine v2.0 568
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene10087 SustainPine v2.0 2119
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v2.0_unigene10127 SustainPine v2.0 1881
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290 gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g11290-like 0.0
C-terminus
sp_v2.0_unigene10170 SustainPine v2.0 2698
AutoFact: Signal recognition particle subunit srp72, putative n=1 Tax=Ricinus communis RepID=B9RMK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: signal recognition particle subunit srp72 0.0
Complete
sp_v2.0_unigene10327 SustainPine v2.0 2631
AutoFact: BR-signaling kinase 1 [Arabidopsis thaliana] sp|Q944A7.1|Y4523_ARATH RecName: Full=Probable serine/threonine-protein kinase At4g35230 gb|AAL27496.1|AF439824_1 AT4g35230/F23E12_210 [Arabidopsis thaliana] gb|AAM98327.1| At4g35230/F23E12_210 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene10372 SustainPine v2.0 603
AutoFact: tetratricopetide-repeat thioredoxin-like 3 [Arabidopsis thaliana] gb|AAK32908.1|AF367321_1 At2g42580/F14N22.15 [Arabidopsis thaliana] gb|AAD22995.2| expressed protein [Arabidopsis thaliana] gb|AAN28880.1| At2g42580/F14N22.15 [Arabidopsis thaliana] gb|AEC1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpr repeat-containing thioredoxin ttl1-like 0.0
Putative C-terminus
sp_v2.0_unigene10407 SustainPine v2.0 435
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 3.46014e-32
C-terminus
sp_v2.0_unigene10546 SustainPine v2.0 963
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SNN7_RICCO 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Putative C-terminus
sp_v2.0_unigene10625 SustainPine v2.0 930
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase ii-associated protein 3-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain