Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Helicase, superfamily 1/2, ATP-binding domain

Term: IPR014001  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene82802 SustainPine v2.0 441
AutoFact: RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A; AltName: Full=ATP-dependent RNA helicase eIF4A 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.1911e-28
N-terminus
sp_v2.0_unigene82825 SustainPine v2.0 518
AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.01773e-16
C-terminus
sp_v2.0_unigene82846 SustainPine v2.0 527
unknown
sp_v2.0_unigene83088 SustainPine v2.0 517
AutoFact: SelP_N multi-domain protein 5.0e-06
unknown
sp_v2.0_unigene83093 SustainPine v2.0 720
AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.48664e-41
Putative Complete
sp_v2.0_unigene83354 SustainPine v2.0 538
AutoFact: Gag-pol polyprotein, putative [Solanum demissum] 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Putative C-terminus
sp_v2.0_unigene83363 SustainPine v2.0 388
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: uncharacterized protein loc100795634 9.50741e-34
Internal
sp_v2.0_unigene83368 SustainPine v2.0 259
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 3.0e-20
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 1.63176e-26
Internal
sp_v2.0_unigene85621 SustainPine v2.0 374
AutoFact: ATP dependent RNA helicase dpb5 [Oryza sativa Indica Group] 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 38-like 7.35503e-38
Putative C-terminus
sp_v2.0_unigene85754 SustainPine v2.0 198
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 5.75918e-31
Internal
sp_v2.0_unigene85850 SustainPine v2.0 897
AutoFact: putative type 1 RNA helicase [Oryza sativa Japonica Group] gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulator of nonsense transcripts 1 homolog 0.0
Putative N-terminus
sp_v2.0_unigene85856 SustainPine v2.0 515
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SJI2_VITVI 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene86502 SustainPine v2.0 311
AutoFact: putative ethylene-responsive RNA helicase [Oryza sativa Japonica Group] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box atp-dependent rna 2.58343e-26
Internal
sp_v2.0_unigene89584 SustainPine v2.0 471
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NP14_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructose-bisphosphate aldolase 0.0
N-terminus
sp_v2.0_unigene91154 SustainPine v2.0 465
AutoFact: leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily protein [Arabidopsis thaliana] dbj|BAB11189.1| unnamed protein product [Arabidopsis thaliana] gb|AAL06927.1| AT5g23340/MKD15_20 [Arabidopsis thaliana] gb|AAM91352.1| At5g23340/MKD15_2 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box lrr-repeat protein 2-like 1.82169e-44
Internal
sp_v2.0_unigene91988 SustainPine v2.0 3334
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SYU7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 37-like 0.0
Putative Complete
sp_v2.0_unigene92262 SustainPine v2.0 530
AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.37591e-43
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain