Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Term: IPR011545  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene35645 SustainPine v2.0 786
• AutoFact: DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana] sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36 gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 36-like 0.0
Putative Complete
sp_v2.0_unigene35913 SustainPine v2.0 694
• AutoFact: putative ATP-dependent RNA helicase [Oryza sativa] 1.0e-08
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 17; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dead-box atp-dependent rna helicase 17-like 1.19001e-10
C-terminus
sp_v2.0_unigene36327 SustainPine v2.0 672
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S466_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 18-like 0.0
Internal
sp_v2.0_unigene36358 SustainPine v2.0 809
• AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 5.0e-07
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: probable atp-dependent rna helicase ythdc2-like 2.25235e-16
N-terminus
sp_v2.0_unigene36629 SustainPine v2.0 938
• AutoFact: putative DEAD-box protein abstrakt [Trifolium pratense] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box protein abstrakt 0.0
N-terminus
sp_v2.0_unigene36661 SustainPine v2.0 928
• AutoFact: Fructose-bisphosphate aldolase n=3 Tax=Solanum tuberosum RepID=Q2PYX3_SOLTU 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fructose-bisphosphate aldolase 0.0
Putative C-terminus
sp_v2.0_unigene36788 SustainPine v2.0 775
• AutoFact: putative DNA helicase [Arabidopsis thaliana] 5.0e-37
• FL-Next: sp=ATP-dependent DNA helicase Q-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna helicase 1.4013e-45
C-terminus
sp_v2.0_unigene36820 SustainPine v2.0 566
• AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: probable atp-dependent rna helicase ythdc2-like 0.0
Internal
sp_v2.0_unigene36929 SustainPine v2.0 642
• AutoFact: Os07g0681600 protein n=3 Tax=Oryza sativa RepID=Q7XHW1_ORYSJ 0.0
• FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent dna helicase 0.0
Internal
sp_v2.0_unigene37063 SustainPine v2.0 314
• AutoFact: RecQ-like helicase 2 [Oryza sativa Japonica Group] 9.80909e-45
• FL-Next: Isoform 2 of ATP-dependent DNA helicase Q-like 2 OS=Arabidopsis thaliana GN=RECQL2 0.0
• Blast2go: atp-dependent dna family expressed 0.0
Internal
sp_v2.0_unigene37146 SustainPine v2.0 397
• AutoFact: PREDICTED: similar to RECQSIM (Arabidopsis RecQ helicase sim); ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019849D7 9.99995e-41
• FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent dna helicase q-like sim-like 0.0
Internal
sp_v2.0_unigene37584 SustainPine v2.0 455
• AutoFact: DNA helicase hus2, putative n=1 Tax=Ricinus communis RepID=B9SXG0_RICCO 2.0e-22
• FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna helicase 1.88456e-25
Internal
sp_v2.0_unigene37784 SustainPine v2.0 2162
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 37-like 0.0
C-terminus
sp_v2.0_unigene37797 SustainPine v2.0 430
• AutoFact: DEA(D/H)-box RNA helicase family protein n=4 Tax=Arabidopsis RepID=F4HYJ6_ARATH 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable atp-dependent rna helicase dhx36-like 0.0
Internal
sp_v2.0_unigene37971 SustainPine v2.0 304
• AutoFact: Isoform 2 of Endoribonuclease Dicer homolog 4 n=1 Tax=Oryza sativa Japonica Group RepID=A7LFZ6-2 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dicer-like protein 1.05491e-38
Internal
sp_v2.0_unigene38226 SustainPine v2.0 441
• AutoFact: protein dicer-like 3 [Arabidopsis thaliana] emb|CAB88120.1| putative protein [Arabidopsis thaliana] gb|ABF19799.1| dicer-like 3 [Arabidopsis thaliana] gb|AEE77842.1| protein dicer-like 3 [Arabidopsis thaliana] 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein dicer-like 3 7.88203e-23
Internal
sp_v2.0_unigene38393 SustainPine v2.0 433
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead-box atp-dependent rna helicase 24-like 0.0
Internal
sp_v2.0_unigene38471 SustainPine v2.0 857
• AutoFact: DNA helicase hus2, putative n=1 Tax=Ricinus communis RepID=B9RFH2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna helicase 0.0
Putative N-terminus
sp_v2.0_unigene38506 SustainPine v2.0 627
• AutoFact: DEAD-box ATP dependent DNA helicase [Dehalococcoides ethenogenes 195] gb|AAW39727.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Dehalococcoides ethenogenes 195] 7.0e-26
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene38740 SustainPine v2.0 398
• AutoFact: putative helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead deah box helicase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain