Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Term: IPR011545  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene29317 SustainPine v2.0 715
• AutoFact: ATP-dependant RNA helicase [Plasmodium vivax SaI-1] gb|EDL44982.1| ATP-dependant RNA helicase, putative [Plasmodium vivax] 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent rna helicase dhx8 0.0
N-terminus
sp_v2.0_unigene29401 SustainPine v2.0 316
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 3.0e-13
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead-box atp-dependent rna helicase 24 1.2582e-16
N-terminus
sp_v2.0_unigene29625 SustainPine v2.0 939
• AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0
• FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 0.0
Internal
sp_v2.0_unigene29648 SustainPine v2.0 809
• AutoFact: DEAD-box ATP-dependent RNA helicase 18 [Arabidopsis thaliana] sp|Q9FLB0.1|RH18_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 18 dbj|BAB09988.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AED90875.1| DEAD-box ATP-dependent 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 18-like 0.0
Internal
sp_v2.0_unigene29728 SustainPine v2.0 698
• AutoFact: Putative helicase n=1 Tax=Oryza sativa RepID=Q8W302_ORYSA 7.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: probable atp-dependent rna helicase dhx36-like 1.73412e-18
N-terminus
sp_v2.0_unigene29935 SustainPine v2.0 1034
• AutoFact: putative ethylene-responsive RNA helicase [Oryza sativa Japonica Group] 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 8.10105e-41
Putative C-terminus
sp_v2.0_unigene30289 SustainPine v2.0 651
• AutoFact: DEAD-box ATP-dependent RNA helicase 35 [Arabidopsis thaliana] sp|Q9LU46.1|RH35_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 35 dbj|BAA97391.1| DEAD-box protein abstrakt [Arabidopsis thaliana] dbj|BAE98527.1| DEAD-box protein abstrakt [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box protein abstrakt 0.0
C-terminus
sp_v2.0_unigene30420 SustainPine v2.0 457
• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 1.0e-31
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 3.29166e-38
N-terminus
sp_v2.0_unigene30606 SustainPine v2.0 466
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S033_RICCO 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 50; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dead-box atp-dependent rna helicase 50-like 0.0
Internal
sp_v2.0_unigene32012 SustainPine v2.0 328
• AutoFact: putative ATP-dependent RNA helicase [Oryza sativa] 2.0e-29
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 17; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dead-box atp-dependent rna helicase 17-like 1.26237e-37
Putative C-terminus
sp_v2.0_unigene32349 SustainPine v2.0 239
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070 gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana] gb|AEE28239.1| pentatricopeptide repea 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at1g74600-like protein 1.32756e-30
Internal
sp_v2.0_unigene32372 SustainPine v2.0 321
• AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9GRS6_POPTR 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: endoribonuclease dicer 0.0
Internal
sp_v2.0_unigene32997 SustainPine v2.0 676
• AutoFact: copper ion transmembrane transporter [Arabidopsis thaliana] gb|AAM67286.1| unknown [Arabidopsis thaliana] gb|AEC09465.1| copper ion transmembrane transporter [Arabidopsis thaliana] 9.99995e-41
• FL-Next: sp=Probable DEAD-box ATP-dependent RNA helicase 48; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: copper ion transmembrane transporter 0.0
N-terminus
sp_v2.0_unigene33678 SustainPine v2.0 756
• AutoFact: DEAD-box ATP-dependent RNA helicase 45 n=2 Tax=Arabidopsis thaliana RepID=RH45_ARATH 6.0e-40
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 45; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead-box atp-dependent rna helicase 42 1.14747e-39
C-terminus
sp_v2.0_unigene33834 SustainPine v2.0 479
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
N-terminus
sp_v2.0_unigene34057 SustainPine v2.0 422
• AutoFact: peptide alpha-N-acetyltransferase [Arabidopsis thaliana] dbj|BAB10599.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96745.1| Unknown protein [Arabidopsis thaliana] gb|AAL47392.1| unknown protein [Arabidopsis thaliana] gb|AAM64579.1| silencing gr 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: silencing group b protein 2.93086e-26
N-terminus
sp_v2.0_unigene34587 SustainPine v2.0 705
• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: u5 small nuclear ribonucleoprotein helicase 0.0
Internal
sp_v2.0_unigene34677 SustainPine v2.0 783
• AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 38-like 0.0
Putative N-terminus
sp_v2.0_unigene34739 SustainPine v2.0 453
• AutoFact: DEAD-box ATP-dependent RNA helicase 16 [Arabidopsis thaliana] sp|Q9SW44.1|RH16_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 16 emb|CAB45452.1| RNA helicase (RH16) [Arabidopsis thaliana] emb|CAB80208.1| RNA helicase (RH16) [Arabidopsis thaliana] 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 0.0
N-terminus
sp_v2.0_unigene34928 SustainPine v2.0 329
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain