Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Term: IPR011545  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene17375 SustainPine v2.0 539
• AutoFact: DEAD-box ATP-dependent RNA helicase 56 n=2 Tax=Arabidopsis thaliana RepID=F4JWF6_ARATH 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 9.64493e-20
N-terminus
sp_v2.0_unigene17531 SustainPine v2.0 2398
• AutoFact: MIP-T3 multi-domain protein 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Complete
sp_v2.0_unigene17637 SustainPine v2.0 1050
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fructose-bisphosphate aldolase 0.0
Putative Complete
sp_v2.0_unigene17837 SustainPine v2.0 1474
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 37-like 0.0
C-terminus
sp_v2.0_unigene18885 SustainPine v2.0 1342
• AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 0.0
C-terminus
sp_v2.0_unigene18994 SustainPine v2.0 1264
• AutoFact: putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box-like rna helicase 0.0
C-terminus
sp_v2.0_unigene19111 SustainPine v2.0 844
• AutoFact: DEAD-box ATP-dependent RNA helicase 46 n=2 Tax=Arabidopsis RepID=F4K6V1_ARATH 6.0e-16
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 46; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead-box atp-dependent rna helicase 46 1.55344e-19
N-terminus
sp_v2.0_unigene19522 SustainPine v2.0 362
• AutoFact: Dicer-like 4 n=1 Tax=Physcomitrella patens RepID=B3SRQ1_9BRYO 6.0e-12
• FL-Next: sp=Dicer-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dsrna-specific nuclease dicer and related ribonuclease 6.85019e-14
Internal
sp_v2.0_unigene19919 SustainPine v2.0 2665
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box rna helicase 0.0
Complete
sp_v2.0_unigene20302 SustainPine v2.0 1007
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
Putative N-terminus
sp_v2.0_unigene20319 SustainPine v2.0 789
• AutoFact: ATP-dependent RNA helicase like protein [Arabidopsis thaliana] emb|CAB78627.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box-like rna helicase 0.0
N-terminus
sp_v2.0_unigene20416 SustainPine v2.0 809
• AutoFact: Probable DEAD-box ATP-dependent RNA helicase 48 n=3 Tax=Arabidopsis RepID=RH48_ARATH 7.0e-32
• FL-Next: sp=Probable DEAD-box ATP-dependent RNA helicase 48; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 1.40933e-36
N-terminus
sp_v2.0_unigene20558 SustainPine v2.0 353
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RGR4_RICCO 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 1.93707e-09
Internal
sp_v2.0_unigene20864 SustainPine v2.0 527
• AutoFact: WS03929.C21_I18 SS-B-24 Picea sitchensis cDNA clone WS03929_I18 3', mRNA sequence. 0.0
Putative coding
sp_v2.0_unigene21088 SustainPine v2.0 2440
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 0.0
Complete
sp_v2.0_unigene21938 SustainPine v2.0 616
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at4g13650-like 0.0
C-terminus
sp_v2.0_unigene22569 SustainPine v2.0 1057
• AutoFact: Cytochrome c oxidase subunit 5C n=8 Tax=Poaceae RepID=COX5C_ORYSJ 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome c oxidase subunit 5c-like 4.40264e-20
Complete
sp_v2.0_unigene23154 SustainPine v2.0 580
• AutoFact: DEAD BOX RNA helicase RH15-like protein [Arabidopsis thaliana] 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.61966e-39
N-terminus
sp_v2.0_unigene23409 SustainPine v2.0 1192
• AutoFact: DEAD-box ATP-dependent RNA helicase 56 n=2 Tax=Arabidopsis thaliana RepID=F4JWF6_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 56 0.0
C-terminus
sp_v2.0_unigene23423 SustainPine v2.0 1290
• AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 14 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain