Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Helicase, C-terminal

Term: IPR001650  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene5849 SustainPine v2.0 613
AutoFact: Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease III, bacterial [Medicago truncatula] 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: endoribonuclease dicer homolog 1-like 0.0
Internal
sp_v2.0_unigene5952 SustainPine v2.0 382
AutoFact: [L] COG4581 Superfamily II RNA helicase 1.0e-08
FL-Next: sp=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 0.0
Internal
sp_v2.0_unigene6012 SustainPine v2.0 542
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: activating signal cointegrator 1 complex subunit 9.49091e-28
Internal
sp_v2.0_unigene6067 SustainPine v2.0 218
AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9HYI3_POPTR 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein dicer-like 2 4.83694e-39
Internal
sp_v2.0_unigene6414 SustainPine v2.0 895
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription-repair-coupling factor-like 0.0
Complete
sp_v2.0_unigene6869 SustainPine v2.0 2268
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] emb|CAB87691.1| putative protein [Arabidopsis thaliana] gb|AAM13183.1| putative protein [Arabidopsis thaliana] gb|AAP68292.1| At5g11730 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene7069 SustainPine v2.0 689
AutoFact: ATP-dependent DNA helicase Q-like 3 n=2 Tax=Arabidopsis thaliana RepID=RQL3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase q-like 3 0.0
Internal
sp_v2.0_unigene7805 SustainPine v2.0 1541
AutoFact: pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl4 0.0
Complete
sp_v2.0_unigene7855 SustainPine v2.0 1035
AutoFact: Amino acid dehydrogenase family protein [Arabidopsis thaliana] gb|AAC13627.1| F6N23.26 gene product [Arabidopsis thaliana] emb|CAB80871.1| putative tetrahydrofolate synthase [Arabidopsis thaliana] gb|AAL24426.1| Unknown protein [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene8046 SustainPine v2.0 599
AutoFact: ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana] sp|Q9FT73.1|RQL2_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 2; AltName: Full=RecQ-like protein 2; Short=AtRecQ2; Short=AtRecQl2 emb|CAC14866.1| DNA Helicase [Arabidopsis thaliana] gb|AE 3.99931e-42
FL-Next: sp=ATP-dependent DNA helicase Q-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent dna helicase q-like 2-like 0.0
Putative N-terminus
sp_v2.0_unigene8252 SustainPine v2.0 1704
AutoFact: DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana] sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36 gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 36-like 0.0
Putative Complete
sp_v2.0_unigene8720 SustainPine v2.0 931
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase splayed 0.0
Putative N-terminus
sp_v2.0_unigene8740 SustainPine v2.0 988
AutoFact: putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 0.0
C-terminus
sp_v2.0_unigene8756 SustainPine v2.0 3811
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Putative Complete
sp_v2.0_unigene8855 SustainPine v2.0 1036
AutoFact: probable ATP-dependent RNA helicase DDX59 [Danio rerio] gb|AAI34851.1| LOC562123 protein [Danio rerio] 7.0e-13
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 41; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
N-terminus
sp_v2.0_unigene8865 SustainPine v2.0 722
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TTS1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 0.0
Putative N-terminus
sp_v2.0_unigene9044 SustainPine v2.0 2637
AutoFact: DEAD-box ATP-dependent RNA helicase 6 n=6 Tax=BEP clade RepID=RH6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 8-like 0.0
Complete
sp_v2.0_unigene9106 SustainPine v2.0 943
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SZG8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hua enhancer 2 0.0
Internal
sp_v2.0_unigene9125 SustainPine v2.0 1088
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983C0B 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase-like transcription factor-like protein 0.0
Putative N-terminus
sp_v2.0_unigene9173 SustainPine v2.0 2059
AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain